RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 IGKV1D-37A0A075B6S9 117 aa3□□□□□ -1.93
CLK1-203ENST00000409769 MFSD2BA6NFX1 497 aa3□□□□□ -1.93
CLK1-203ENST00000409769 TCF21O43680 179 aa3□□□□□ -1.93
CLK1-203ENST00000409769 OR2J3O76001 311 aa3□□□□□ -1.93
CLK1-203ENST00000409769 IFNA4P05014 189 aa3□□□□□ -1.93
CLK1-203ENST00000409769 OPRK1P41145 380 aa3□□□□□ -1.93
CLK1-203ENST00000409769 CNN1P51911 297 aaKnown RBP3□□□□□ -1.93
CLK1-203ENST00000409769 KRTAP10-1P60331 282 aa3□□□□□ -1.93
CLK1-203ENST00000409769 DEFA5Q01523 94 aa3□□□□□ -1.93
CLK1-203ENST00000409769 GAMTQ14353 236 aa3□□□□□ -1.93
CLK1-203ENST00000409769 RPL7L1Q6DKI1 246 aaKnown RBP3□□□□□ -1.93
CLK1-203ENST00000409769 OR8G2PQ6IF36 304 aa3□□□□□ -1.93
CLK1-203ENST00000409769 ETFRF1Q6IPR1 90 aa3□□□□□ -1.93
CLK1-203ENST00000409769 SLC25A24Q6NUK1 477 aa3□□□□□ -1.93
CLK1-203ENST00000409769 C10orf99Q6UWK7 81 aa3□□□□□ -1.93
CLK1-203ENST00000409769 TMEM144Q7Z5S9 345 aa3□□□□□ -1.93
CLK1-203ENST00000409769 SLC51BQ86UW2 128 aa3□□□□□ -1.93
CLK1-203ENST00000409769 BAP18Q8IXM2 172 aa3□□□□□ -1.93
CLK1-203ENST00000409769 OR5T1Q8NG75 326 aa3□□□□□ -1.93
CLK1-203ENST00000409769 OR4X1Q8NH49 305 aa3□□□□□ -1.93
CLK1-203ENST00000409769 LINC01006Q8NI28 216 aa3□□□□□ -1.93
CLK1-203ENST00000409769 ATP6V0BQ99437 205 aa3□□□□□ -1.93
CLK1-203ENST00000409769 GON7Q9BXV9 100 aa3□□□□□ -1.93
CLK1-203ENST00000409769 NPCDR1Q9BY65 106 aa3□□□□□ -1.93
CLK1-203ENST00000409769 NPVFQ9HCQ7 196 aa3□□□□□ -1.93
CLK1-203ENST00000409769 UQCC1Q9NVA1 299 aa3□□□□□ -1.93
CLK1-203ENST00000409769 LINC00527Q9UJ94 153 aa3□□□□□ -1.93
CLK1-203ENST00000409769 PAIP2BQ9ULR5 123 aaKnown RBP3□□□□□ -1.93
CLK1-203ENST00000409769 TIMM9Q9Y5J7 89 aa3□□□□□ -1.93
CLK1-203ENST00000409769 WNK1Q9H4A3 2382 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 BORCS7-ASMTA0A0B4J1R7 106 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 IGHV3-21A0A0B4J1V1 117 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 UBE2L5PA0A1B0GUS4 154 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 PSMB11A5LHX3 300 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 FAM223BA6NKX1 122 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 CYB5BO43169 146 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 MPDU1O75352 247 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 DUSP14O95147 198 aaKnown RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 CFDP00746 253 aaPredicted RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 IFNA5P01569 189 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 IGKV1-17P01599 117 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 CRYBA1P05813 215 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 SEC11BP0C7V7 166 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 IGLC1P0CG04 106 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 CT45A10P0DMU9 189 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 DEFA4P12838 97 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 TPT1P13693 172 aaKnown RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 ATP6V0CP27449 155 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 RAB9AP51151 201 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 RND2P52198 227 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 SSTP61278 116 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 EIF5AP63241 154 aaKnown RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 RHOGP84095 191 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 RUNX1Q01196 453 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 TEX261Q6UWH6 196 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 FAM223AQ8IWN6 122 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 COMMD1Q8N668 190 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 NECAP1Q8NC96 275 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 OR2G3Q8NGZ4 309 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 ZNF502Q8TBZ5 544 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 DLX4Q92988 240 aaPredicted RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 PHYHIPLQ96FC7 376 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 USMG5Q96IX5 58 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 SLC35E1Q96K37 410 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 TRGV9Q99603 122 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 MGST2Q99735 147 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 TXN2Q99757 166 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 PSMG3Q9BT73 122 aaPredicted RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 RSG1Q9BU20 258 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 GGTLC1Q9BX51 225 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 ZNF471Q9BX82 626 aaPredicted RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 SH3BGRL3Q9H299 93 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 ZC4H2Q9NQZ6 224 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 C21orf62Q9NYP8 219 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 RFNGQ9Y644 331 aa2.99□□□□□ -1.93
CLK1-203ENST00000409769 SETD2Q9BYW2 2564 aaPredicted RBP2.99□□□□□ -1.93
CLK1-203ENST00000409769 TRAV30A0A087WSZ9 112 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.98□□□□□ -1.93
CLK1-203ENST00000409769 TRBV7-1A0A0A6YYK4 115 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 TCRBV4S1A1TA0A5B7 111 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 CLPSL1A2RUU4 121 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 AGPAT2O15120 278 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 YIF1AO95070 293 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 IGHV3-48P01763 117 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 IGHV3-23P01764 117 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 TRGV3P03979 118 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 CTSGP08311 255 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 LINC00869P0C866 280 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 FGF7P21781 194 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 OR10J1P30954 320 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 RPL29P47914 159 aaKnown RBP2.98□□□□□ -1.93
CLK1-203ENST00000409769 RIPPLY3P57055 190 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 TPPP2P59282 170 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 PLP1P60201 277 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 YPEL3P61236 119 aaPredicted RBP2.98□□□□□ -1.93
CLK1-203ENST00000409769 SLC35B1P78383 322 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 ZNF90Q03938 601 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 AKR1C1Q04828 323 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 ATP5G2Q06055 141 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 ADAMTSL5Q6ZMM2 481 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms