RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 PSG3Q16557 428 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 CT83Q5H943 113 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 HIST2H2BCQ6DN03 193 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 PRR27Q6MZM9 219 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 RASL11AQ6T310 242 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 TSKUQ8WUA8 353 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 SGK494Q96LW2 274 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 PRSS22Q9GZN4 317 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 CLEC5AQ9NY25 188 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 PSG8Q9UQ74 426 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 SMAD5-AS1Q9Y6J3 95 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 U3KQE9 123 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 GCN1Q92616 2671 aaKnown RBP4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 ABCA2Q9BZC7 2435 aa4.84□□□□□ -1.63
GTF3C3-202ENST00000409364 A0A1W2PS18 150 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 CLPSL1A2RUU4 121 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 C19orf71A6NCJ1 209 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 FAM231BA6NCW3 169 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 P01737 135 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHG4P01861 327 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 CFHR3Q02985 330 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 COA6Q5JTJ3 125 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 SAPCD1Q5SSQ6 148 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 Q6ZS46 218 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 PRNTQ86SH4 94 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 Q86TA4 180 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 LINC00518Q8N0U6 118 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 OR4B1Q8NGF8 309 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 OR4X2Q8NGF9 303 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 SLC50A1Q9BRV3 221 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 KLK15Q9H2R5 256 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 ZNF331Q9NQX6 463 aaPredicted RBP4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 NAT8BQ9UHF3 227 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 VPREB3Q9UKI3 123 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 CHTOPQ9Y3Y2 248 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 FBN2P35556 2912 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 CELSR2Q9HCU4 2923 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 ANKRD17O75179 2603 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 TRAV8-1A0A0A6YYK1 113 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 XKRY2A2RUG3 117 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 M0R3E3 92 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 S100A2P29034 98 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 SLC35B1P78383 322 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 LCN12Q6JVE5 192 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 COX8CQ7Z4L0 72 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 GFRA4Q9GZZ7 299 aa4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 RPP21Q9H633 154 aaKnown RBP4.83□□□□□ -1.64
GTF3C3-202ENST00000409364 ABCA12Q86UK0 2595 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV3OR16-8A0A075B7F1 116 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 NPIPB6E9PJ23 425 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 HLA-DQA1P01909 254 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 CT45A10P0DMU9 189 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 PSMB8P28062 276 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 TCL1AP56279 114 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 FAM106AQ4KMX7 169 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 ATP5L2Q7Z4Y8 100 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 GBGT1Q8N5D6 347 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 NUP35Q8NFH5 326 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 MRPL18Q9H0U6 180 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 PEF1Q9UBV8 284 aaKnown RBP4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 CREBBPQ92793 2442 aa4.82□□□□□ -1.64
GTF3C3-202ENST00000409364 RBAKDNA6NC62 111 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 HIGD1CA8MV81 97 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 SNURFLB1AK76 121 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 K7EMT4 169 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 CHEK1O14757 476 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 HOXA3O43365 443 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 CA1P00915 261 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV3-11P01762 117 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 ELANEP08246 267 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 CBLN1P23435 193 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 FOXA3P55318 350 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 LINC00322Q6ZN03 302 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 GPHB5Q86YW7 130 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 HIST3H2BBQ8N257 126 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 CIARTQ8N365 385 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 TMEM86BQ8N661 226 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 WIPF2Q8TF74 440 aaPredicted RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 MRPL53Q96EL3 112 aaKnown RBP4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 NEU1Q99519 415 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 FOXC2Q99958 501 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 GPR61Q9BZJ8 451 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 SVEP1Q4LDE5 3571 aa4.81□□□□□ -1.64
GTF3C3-202ENST00000409364 IGHV3-66A0A0C4DH42 116 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 ZNF207O43670 478 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 SPINK4O60575 86 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 APOHP02749 345 aaPredicted RBP4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 SMIM6P0DI80 62 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 CRISP2P16562 243 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 BMI1P35226 326 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 RAB4BP61018 213 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 FOXE3Q13461 319 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 C4orf48Q5BLP8 95 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 TMEM136Q6ZRR5 245 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 RBPMS2Q6ZRY4 209 aaKnown RBP4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 WFDC11Q8NEX6 87 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 OR2D3Q8NGH3 330 aa4.8□□□□□ -1.64
GTF3C3-202ENST00000409364 GLMPQ8WWB7 406 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms