RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 UQCR10Q9UDW1 63 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 C15orf65H3BRN8 121 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 C1QL4Q86Z23 238 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 IMMP2LQ96T52 175 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 SH2D1AO60880 128 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 OCC1Q8TAD7 63 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 FABP2P12104 132 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 CKS1BP61024 79 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 ATOH7Q8N100 152 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 Q8NA96 180 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 CARHSP1Q9Y2V2 147 aaKnown RBP3.99□□□□□ -1.77
HDAC9-204ENST00000406451 LRP4O75096 1905 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 TRAV1-1A0A0B4J248 108 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 H3BUA1 57 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 GZMBP10144 247 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 RSPO1Q2MKA7 263 aaPredicted RBP3.99□□□□□ -1.77
HDAC9-204ENST00000406451 JKAMPQ9P055 326 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 MMP23AO75900 390 aa3.99□□□□□ -1.77
HDAC9-204ENST00000406451 SETD2Q9BYW2 2564 aaPredicted RBP3.99□□□□□ -1.77
HDAC9-204ENST00000406451 CCL24O00175 119 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 NUDT10Q8NFP7 164 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 PGPEP1LA6NFU8 196 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 IGHV4-38-2P0DP08 117 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 ATP5L2Q7Z4Y8 100 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 C8orf31Q8N9H6 132 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RNF138Q8WVD3 245 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 TRBV7-9A0A0J9YWB2 115 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RBMY1BA6NDE4 496 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RBMY1EA6NEQ0 496 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 LINC01549A6NIU2 74 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RBMY1DP0C7P1 496 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RBMY1A1P0DJD3 496 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RBMY1CP0DJD4 496 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 LINC00469Q8N7U9 141 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 MRPL27Q9P0M9 148 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 SPINK13Q1W4C9 94 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 NUDT11Q96G61 164 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 CTSZQ9UBR2 303 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 GFI1BQ5VTD9 330 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 FAM90A2PQ658T7 463 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 OR11H6Q8NGC7 330 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 SLC25A20O43772 301 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 HBDP02042 147 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 LAGE3Q14657 143 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 FBXL19-AS1Q494R0 122 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RNF182Q8N6D2 247 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 EREGO14944 169 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 ERCC8Q13216 396 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 FOXE3Q13461 319 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RPP25LQ8N5L8 163 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 C11orf68Q9H3H3 251 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 TRAV8-1A0A0A6YYK1 113 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 A0A0G2JRQ6 117 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 RPLP1P05386 114 aaKnown RBP3.98□□□□□ -1.77
HDAC9-204ENST00000406451 MLANAQ16655 118 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 ZNF876PQ49A33 203 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 Q6ZRM9 215 aa3.98□□□□□ -1.77
HDAC9-204ENST00000406451 C9orf66Q5T8R8 295 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 LYZL1Q6UWQ5 148 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 TMEM86BQ8N661 226 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 MRAPQ8TCY5 172 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 TPSG1Q9NRR2 321 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 FN1P02751 2386 aaKnown RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 IGHV7-4-1A0A0J9YVY3 117 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 LHBP01229 141 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 COL5A1-AS1Q5SY13 56 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 C8orf86Q6ZUL3 223 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 C14orf178Q8N769 122 aaPredicted RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 ARHGAP32A7KAX9 2087 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 HOXD3P31249 432 aaPredicted RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 TMEM158Q8WZ71 300 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 PARD6GQ9BYG4 376 aaPredicted RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 RHODO00212 210 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 ZNF134P52741 427 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 USP9XQ93008 2570 aaPredicted RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 SEM1Q6ZVN7 128 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 ST6GALNAC6Q969X2 333 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 C1orf147Q96MC9 270 aaPredicted RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 MRPL16Q9NX20 251 aaKnown RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 CFHR3Q02985 330 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 TMEM95Q3KNT9 176 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 FAM19A2Q8N3H0 131 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 A0A087WWL8 130 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 VCYO14598 125 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 IGLV3-1P01715 115 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 TTC9CQ8N5M4 171 aa3.97□□□□□ -1.77
HDAC9-204ENST00000406451 RSPO3Q9BXY4 272 aaPredicted RBP3.97□□□□□ -1.77
HDAC9-204ENST00000406451 MUC22E2RYF6 1773 aaPredicted RBP3.96□□□□□ -1.77
HDAC9-204ENST00000406451 CENPVL3A0A0U1RRI6 287 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 LGALS1P09382 135 aaKnown RBP3.96□□□□□ -1.77
HDAC9-204ENST00000406451 DIAPH2-AS1Q14236 149 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 Q86TA4 180 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 C11orf53Q8IXP5 236 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 GNB1LQ9BYB4 327 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 DPM2O94777 84 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 CDKN1BP46527 198 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 ZNF843Q8N446 348 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 C1orf159Q96HA4 380 aa3.96□□□□□ -1.77
HDAC9-204ENST00000406451 DEFB136Q30KP8 78 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms