RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 SMIM12Q96EX1 92 aa15.98■□□□□ 0.15
TPM1-208ENST00000404484 TSSC4Q9Y5U2 329 aaPredicted RBP15.98■□□□□ 0.15
TPM1-208ENST00000404484 DNASE2O00115 360 aaPredicted RBP15.97■□□□□ 0.15
TPM1-208ENST00000404484 SYNJ2BPP57105 145 aa15.97■□□□□ 0.15
TPM1-208ENST00000404484 SAMD13Q5VXD3 122 aa15.97■□□□□ 0.15
TPM1-208ENST00000404484 OR11H1Q8NG94 326 aa15.97■□□□□ 0.15
TPM1-208ENST00000404484 IGF2BP2-AS1Q96M15 143 aa15.97■□□□□ 0.15
TPM1-208ENST00000404484 TMEM242Q9NWH2 141 aa15.97■□□□□ 0.15
TPM1-208ENST00000404484 TMEM213A2RRL7 107 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 CD28P10747 220 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 KLF5Q13887 457 aaPredicted RBP15.96■□□□□ 0.15
TPM1-208ENST00000404484 TMEM88Q6PEY1 159 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 C18orf65Q6ZTR6 163 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 OCC1Q8TAD7 63 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 ISOC2Q96AB3 205 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 CITED1Q99966 193 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 TUBA4BQ9H853 241 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 WNK1Q9H4A3 2382 aa15.96■□□□□ 0.15
TPM1-208ENST00000404484 TRBV6-1A0A0K0K1D8 114 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 FBLL1A6NHQ2 334 aaKnown RBP15.96■□□□□ 0.14
TPM1-208ENST00000404484 ISLRO14498 428 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 RNF212Q495C1 297 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 C8orf86Q6ZUL3 223 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 GOLT1AQ6ZVE7 132 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 BAGE2Q86Y30 109 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 CBLN2Q8IUK8 224 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 ANAPC16Q96DE5 110 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 MRPL53Q96EL3 112 aaKnown RBP15.96■□□□□ 0.14
TPM1-208ENST00000404484 PEMTQ9UBM1 199 aa15.96■□□□□ 0.14
TPM1-208ENST00000404484 MGAM2Q2M2H8 2515 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 CXorf65A6NEN9 183 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 DIRC3C9JPN6 131 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 M0QZ24 198 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 PPP1R2P9O14990 202 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 DEFB136Q30KP8 78 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 TMEM75Q8N9X5 138 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 LINC00479Q96M42 142 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 NBEAL1Q6ZS30 2694 aa15.95■□□□□ 0.14
TPM1-208ENST00000404484 FBN3Q75N90 2809 aa15.94■□□□□ 0.14
TPM1-208ENST00000404484 TRAV34A0A0B4J273 112 aa15.94■□□□□ 0.14
TPM1-208ENST00000404484 PGPEP1LA6NFU8 196 aa15.94■□□□□ 0.14
TPM1-208ENST00000404484 NRN1Q9NPD7 142 aa15.94■□□□□ 0.14
TPM1-208ENST00000404484 PKD1L1Q8TDX9 2849 aa15.93■□□□□ 0.14
TPM1-208ENST00000404484 M0R3E3 92 aa15.93■□□□□ 0.14
TPM1-208ENST00000404484 C16orf92Q96LL3 132 aa15.93■□□□□ 0.14
TPM1-208ENST00000404484 CITED2Q99967 270 aaPredicted RBP15.93■□□□□ 0.14
TPM1-208ENST00000404484 BIN3Q9NQY0 253 aa15.93■□□□□ 0.14
TPM1-208ENST00000404484 H7BYZ3 331 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 SLURP1P55000 103 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 RPL11P62913 178 aaKnown RBP15.92■□□□□ 0.14
TPM1-208ENST00000404484 TCF24Q7RTU0 167 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 SFRP2Q96HF1 295 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 C2orf70A6NJV1 201 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 LTAP01374 205 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 PSG3Q16557 428 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 Q86TA4 180 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 C11orf44Q8N8P7 122 aa15.92■□□□□ 0.14
TPM1-208ENST00000404484 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.92■□□□□ 0.14
TPM1-208ENST00000404484 AURKAIP1Q9NWT8 199 aaPredicted RBP15.92■□□□□ 0.14
TPM1-208ENST00000404484 K7EN84 100 aa15.91■□□□□ 0.14
TPM1-208ENST00000404484 GCGP01275 180 aa15.91■□□□□ 0.14
TPM1-208ENST00000404484 MGST1P10620 155 aaKnown RBP15.91■□□□□ 0.14
TPM1-208ENST00000404484 CBLN1P23435 193 aa15.91■□□□□ 0.14
TPM1-208ENST00000404484 FLI1Q01543 452 aaPredicted RBP15.91■□□□□ 0.14
TPM1-208ENST00000404484 LCN12Q6JVE5 192 aa15.91■□□□□ 0.14
TPM1-208ENST00000404484 IGLV2-8P01709 118 aa15.9■□□□□ 0.14
TPM1-208ENST00000404484 FHL3Q13643 280 aa15.9■□□□□ 0.14
TPM1-208ENST00000404484 C15orf54Q8N8G6 183 aa15.9■□□□□ 0.14
TPM1-208ENST00000404484 OR9G4Q8NGQ1 327 aa15.9■□□□□ 0.14
TPM1-208ENST00000404484 ZFP30Q9Y2G7 519 aa15.9■□□□□ 0.14
TPM1-208ENST00000404484 TRAV8-2A0A0B4J237 113 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 A0A1W2PRX2 142 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 CCL24O00175 119 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 FOLR2P14207 255 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 HIST2H2BDQ6DRA6 164 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 OR10G8Q8NGN5 311 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 RAX2Q96IS3 184 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 MLXQ9UH92 298 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 PSG8Q9UQ74 426 aa15.89■□□□□ 0.13
TPM1-208ENST00000404484 RBAKDNA6NC62 111 aa15.88■□□□□ 0.13
TPM1-208ENST00000404484 IGLV2-11P01706 119 aa15.88■□□□□ 0.13
TPM1-208ENST00000404484 PRNTQ86SH4 94 aa15.88■□□□□ 0.13
TPM1-208ENST00000404484 VWFP04275 2813 aa15.88■□□□□ 0.13
TPM1-208ENST00000404484 TRAV8-1A0A0A6YYK1 113 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 SOCS3O14543 225 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 HLA-DMBP28068 263 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 ID1P41134 155 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 ERVFC1-1P60608 527 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 PRR31Q5SQ13 230 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 IGFL4Q6B9Z1 124 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 TMEM183AQ8IXX5 376 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 SGK494Q96LW2 274 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 MLST8Q9BVC4 326 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 OSTCQ9NRP0 149 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 EDN2P20800 178 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 S100PP25815 95 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 RNF182Q8N6D2 247 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 DLX4Q92988 240 aaPredicted RBP15.87■□□□□ 0.13
TPM1-208ENST00000404484 DUX3Q96PT4 197 aa15.87■□□□□ 0.13
TPM1-208ENST00000404484 IGKV2-40A0A087WW87 121 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 217.9 ms