RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 ICAM4Q14773 271 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 ZNF726P1Q15940 193 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 C9orf62Q8N4C0 152 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 PHYHIPLQ96FC7 376 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 OVOL2Q9BRP0 275 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 CLEC5AQ9NY25 188 aa12.58□□□□□ -0.4
PTCHD3P3-201ENST00000403073 M0R3E3 92 aa12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 SPRY2O43597 315 aa12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 DUSP14O95147 198 aaKnown RBP12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 SEC11BP0C7V7 166 aa12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 ARL14EPLP0DKL9 152 aa12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 TPT1P13693 172 aaKnown RBP12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 EIF5AP63241 154 aaKnown RBP12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 RNF183Q96D59 192 aa12.57□□□□□ -0.4
PTCHD3P3-201ENST00000403073 STOML3Q8TAV4 291 aa12.56□□□□□ -0.4
PTCHD3P3-201ENST00000403073 CLUHP3Q96NS8 147 aa12.56□□□□□ -0.4
PTCHD3P3-201ENST00000403073 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
PTCHD3P3-201ENST00000403073 AAMDCQ9H7C9 122 aa12.56□□□□□ -0.4
PTCHD3P3-201ENST00000403073 TGP01266 2768 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 GCHFRP30047 84 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 FHITP49789 147 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 NKX2-5P52952 324 aaPredicted RBP12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 NUTF2P61970 127 aaKnown RBP12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 TMED6Q8WW62 240 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 Q9H3A6 140 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 XCL2Q9UBD3 114 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 PRELID1Q9Y255 219 aa12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 HUWE1Q7Z6Z7 4374 aaKnown RBP12.55□□□□□ -0.4
PTCHD3P3-201ENST00000403073 COL7A1Q02388 2944 aa12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 CTXND1A0A1B0GTU2 59 aa12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 A8MTW9 85 aa12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 CXorf1O96002 111 aa12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 TP53TG1Q9Y2A0 90 aa12.54□□□□□ -0.4
PTCHD3P3-201ENST00000403073 FGF8P55075 233 aaPredicted RBP12.53□□□□□ -0.4
PTCHD3P3-201ENST00000403073 SLC51BQ86UW2 128 aa12.53□□□□□ -0.4
PTCHD3P3-201ENST00000403073 IQCF2Q8IXL9 164 aa12.53□□□□□ -0.4
PTCHD3P3-201ENST00000403073 LYPD1Q8N2G4 141 aa12.53□□□□□ -0.4
PTCHD3P3-201ENST00000403073 CSNK1G2-AS1Q8NCQ2 148 aa12.53□□□□□ -0.4
PTCHD3P3-201ENST00000403073 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
PTCHD3P3-201ENST00000403073 PGPA6NDG6 321 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 UMAD1C9J7I0 102 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 ERCC8Q13216 396 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 FAM213BQ8TBF2 198 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 SUN5Q8TC36 379 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 TMPRSS5Q9H3S3 457 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 PPP1R14DQ9NXH3 145 aa12.52□□□□□ -0.41
PTCHD3P3-201ENST00000403073 MAP1LC3B2A6NCE7 125 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 M0R2Z0 102 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 SPINK13Q1W4C9 94 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 OR11H2Q8NH07 326 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 RARRES2Q99969 163 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 C1QTNF4Q9BXJ3 329 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 MAP1LC3BQ9GZQ8 125 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 OTORQ9NRC9 128 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 TMEM167BQ9NRX6 74 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 NBEAL2Q6ZNJ1 2754 aa12.51□□□□□ -0.41
PTCHD3P3-201ENST00000403073 IGKV2-40A0A087WW87 121 aaPredicted RBP12.5□□□□□ -0.41
PTCHD3P3-201ENST00000403073 NPIPB6E9PJ23 425 aa12.5□□□□□ -0.41
PTCHD3P3-201ENST00000403073 IGKV2D-40P01614 121 aaPredicted RBP12.5□□□□□ -0.41
PTCHD3P3-201ENST00000403073 CT45A10P0DMU9 189 aa12.5□□□□□ -0.41
PTCHD3P3-201ENST00000403073 BOLA2-SMG1P6H3BVE0 249 aa12.49□□□□□ -0.41
PTCHD3P3-201ENST00000403073 CSN1S1P47710 185 aa12.49□□□□□ -0.41
PTCHD3P3-201ENST00000403073 EIF5AL1Q6IS14 154 aaKnown RBP12.49□□□□□ -0.41
PTCHD3P3-201ENST00000403073 SFT2D1Q8WV19 159 aa12.49□□□□□ -0.41
PTCHD3P3-201ENST00000403073 VGLL1Q99990 258 aa12.49□□□□□ -0.41
PTCHD3P3-201ENST00000403073 AGPAT4-IT1Q9H0P7 198 aa12.49□□□□□ -0.41
PTCHD3P3-201ENST00000403073 TRAV12-2A0A075B6T6 113 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 CRXO43186 299 aaPredicted RBP12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 FAM74A1Q5RGS3 127 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 DPPA3Q6W0C5 159 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 CMTM2Q8TAZ6 248 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 MBD3L1Q8WWY6 194 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 RPH3ALQ9UNE2 315 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 AGRNO00468 2067 aa12.48□□□□□ -0.41
PTCHD3P3-201ENST00000403073 IGHV3OR16-12A0A075B7B8 117 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 A0A1B0GV50 99 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 UBE2G2P60604 165 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 KIR3DS1Q14943 382 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 C9orf47Q6ZRZ4 202 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 C1orf158Q8N1D5 194 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 IGF2BP2-AS1Q96M15 143 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 LINC00477Q96M19 166 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 EDA2RQ9HAV5 297 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 YTHDF2Q9Y5A9 579 aaKnown RBP12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 X6R8D5 127 aa12.47□□□□□ -0.41
PTCHD3P3-201ENST00000403073 AMBPP02760 352 aa12.46□□□□□ -0.41
PTCHD3P3-201ENST00000403073 SLC25A5P05141 298 aaKnown RBP12.46□□□□□ -0.41
PTCHD3P3-201ENST00000403073 H2AFB1P0C5Y9 115 aa12.46□□□□□ -0.41
PTCHD3P3-201ENST00000403073 SUMO1P63165 101 aaKnown RBP12.46□□□□□ -0.41
PTCHD3P3-201ENST00000403073 GNG5P63218 68 aa12.46□□□□□ -0.41
PTCHD3P3-201ENST00000403073 A0A0J9YWU9 116 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms