RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 CHCHD1Q96BP2 118 aaKnown RBP13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 PRR25Q96S07 402 aa13.73□□□□□ -0.21
HLA-DQB1-204ENST00000399084 IGHV4-30-2A0A087WSY4 118 aa13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 A6NDX4 124 aa13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 F2Z2F3 143 aa13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 HSBP1O75506 76 aa13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 FAM209BQ5JX69 171 aa13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 NDUFAF3Q9BU61 184 aa13.72□□□□□ -0.21
HLA-DQB1-204ENST00000399084 LOC102724200A0A096LPH7 203 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF705FA8MVS1 300 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF705DP0CH99 300 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 ZNF705BP0CI00 300 aaPredicted RBP13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 CRIP1P50238 77 aa13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 LCN12Q6JVE5 192 aa13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 RCHY1Q96PM5 261 aa13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 PRO1933Q9H354 126 aa13.71□□□□□ -0.21
HLA-DQB1-204ENST00000399084 KIR2DL5BA0A0G2JN68 375 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 KIR2DL5BA0A0G2JPC4 375 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 TMEM189A5PLL7 270 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 LINC01548A6NM66 108 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 J3QLI3 93 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 KIR2DL5AQ8N109 375 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 C20orf144Q9BQM9 153 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 CLPSL1A2RUU4 121 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 ZNF493Q6ZR52 646 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 C14orf144Q96I85 54 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 PPP1R14DQ9NXH3 145 aa13.7□□□□□ -0.22
HLA-DQB1-204ENST00000399084 TRGV3P03979 118 aa13.69□□□□□ -0.22
HLA-DQB1-204ENST00000399084 BRD3OSQ6XYD6 125 aa13.69□□□□□ -0.22
HLA-DQB1-204ENST00000399084 TMEM219Q86XT9 240 aa13.69□□□□□ -0.22
HLA-DQB1-204ENST00000399084 LURAP1LQ8IV03 231 aa13.69□□□□□ -0.22
HLA-DQB1-204ENST00000399084 SSBP4Q9BWG4 385 aaPredicted RBP13.69□□□□□ -0.22
HLA-DQB1-204ENST00000399084 IGSF10Q6WRI0 2623 aa13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 NDUFA4O00483 81 aa13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 IGHG4P01861 327 aa13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 OR5AL1P0C617 328 aa13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 MRPL52Q86TS9 123 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 FLNBO75369 2602 aaKnown RBP13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 TACC2O95359 2948 aa13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 RELNP78509 3460 aa13.68□□□□□ -0.22
HLA-DQB1-204ENST00000399084 A0A0G2JLM5 398 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 IGHV4-38-2P0DP08 117 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 PPIFP30405 207 aaKnown RBP13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 NIT1Q86X76 327 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 FABP5P3A8MUU1 101 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 SH2D1AO60880 128 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 COX6B1P14854 86 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 PMCHL1Q16048 86 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 LINC01356Q8N9X3 169 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 C8orf49Q96NF6 230 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 ASCL2Q99929 193 aa13.67□□□□□ -0.22
HLA-DQB1-204ENST00000399084 H3BUX3 64 aa13.66□□□□□ -0.22
HLA-DQB1-204ENST00000399084 KRTDAPP60985 99 aa13.66□□□□□ -0.22
HLA-DQB1-204ENST00000399084 VAMP8Q9BV40 100 aa13.66□□□□□ -0.22
HLA-DQB1-204ENST00000399084 MED13LQ71F56 2210 aa13.66□□□□□ -0.22
HLA-DQB1-204ENST00000399084 IGHV3OR16-10A0A075B7F0 116 aa13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 IGKV2-40A0A087WW87 121 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 IGKV2D-40P01614 121 aaPredicted RBP13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 ARL3P36405 182 aa13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 LENEPQ9Y5L5 61 aa13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 DOPEY1Q5JWR5 2465 aa13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 ASH1LQ9NR48 2969 aaKnown RBP13.65□□□□□ -0.22
HLA-DQB1-204ENST00000399084 M0R2Z0 102 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LINC00614P0C842 121 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 IGHV3-35A0A0C4DH35 117 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 TMEM89A2RUT3 159 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 ARMS2P0C7Q2 107 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 NTF3P20783 257 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 CTRLP40313 264 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 VGLL1Q99990 258 aa13.64□□□□□ -0.23
HLA-DQB1-204ENST00000399084 IGLV1-40P01703 118 aa13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 BTF3P20290 206 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 HIST1H1AQ02539 215 aaPredicted RBP13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 C9orf47Q6ZRZ4 202 aa13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 C9orf139Q6ZV77 190 aa13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 HELZ2Q9BYK8 2649 aaKnown RBP13.63□□□□□ -0.23
HLA-DQB1-204ENST00000399084 C20orf202A1L168 122 aa13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 FAM181BA6NEQ2 426 aa13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 Q8N976 141 aa13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 GLMPQ8WWB7 406 aa13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 BBC3Q96PG8 261 aaPredicted RBP13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 MIEN1Q9BRT3 115 aa13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 CNFNQ9BYD5 112 aa13.62□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 TMEM78Q5T7P6 136 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LYZL1Q6UWQ5 148 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 FAM19A2Q8N3H0 131 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 CRXO43186 299 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 IGLC6P0CF74 106 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 CD33P20138 364 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 ZNF138P52744 262 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 LOXL1Q08397 574 aaPredicted RBP13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 SAMD13Q5VXD3 122 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 C8orf86Q6ZUL3 223 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 KLHDC1Q8N7A1 406 aa13.61□□□□□ -0.23
HLA-DQB1-204ENST00000399084 FER1L6-AS1Q8NA97 138 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms