RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ZNF492Q9P255 531 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 ACACAQ13085 2346 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 AZU1P20160 251 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 GLRXP35754 106 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 CRIP1P50238 77 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 ATP5IP56385 69 aaPredicted RBP7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 HSD52Q0P140 79 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 SFTA2Q6UW10 78 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 AMTNQ6UX39 209 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 GTSCR1Q86UQ5 136 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 FBXL15Q9H469 300 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 DSCAML1Q8TD84 2053 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 GAS8-AS1O95177 125 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 CNIH1O95406 144 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 COX7A1P24310 79 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM75Q8N9X5 138 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 THAP8Q8NA92 274 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 Q8TAT8 98 aa7.82□□□□□ -1.16
PTCHD4-202ENST00000398738 IGKV2D-26A0A0A0MRZ7 120 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 IGLV2-11P01706 119 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 SMIM13P0DJ93 91 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 ZNF474Q6S9Z5 364 aaPredicted RBP7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 SH2D6Q7Z4S9 175 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 GFRA4Q9GZZ7 299 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 OTORQ9NRC9 128 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 MSRB1Q9NZV6 116 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 RIF1Q5UIP0 2472 aaKnown RBP7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 NPIPB5A8MRT5 1133 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 NPYP01303 97 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 BOD1L2Q8IYS8 172 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 TSSC4Q9Y5U2 329 aaPredicted RBP7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 LINC00312Q9Y6C7 94 aa7.81□□□□□ -1.16
PTCHD4-202ENST00000398738 APC2O95996 2303 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 PPIAL4EA0A075B759 164 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 IGKV2-40A0A087WW87 121 aaPredicted RBP7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM189A5PLL7 270 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 IGKV2D-40P01614 121 aaPredicted RBP7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 IGLV2-23P01705 113 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 IGHV3-23P01764 117 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 PPIAL4FP0DN26 164 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 WFDC2Q14508 124 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 ADAMTSL5Q6ZMM2 481 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 ORMDL3Q8N138 153 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 PLSCR4Q9NRQ2 329 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 CIDEAO60543 219 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 HBDP02042 147 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 IL4P05112 153 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 GATA1P15976 413 aaPredicted RBP7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 LGALS7P47929 136 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 MRPL51Q4U2R6 128 aaKnown RBP7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 C16orf54Q6UWD8 224 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 C1orf210Q8IVY1 113 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 DKK4Q9UBT3 224 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 K7EQM0 130 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM160Q9NX00 188 aa7.8□□□□□ -1.16
PTCHD4-202ENST00000398738 NDUFS7O75251 213 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 FCN3O75636 299 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 ORM1P02763 201 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 APOBEC3AP31941 199 aaPredicted RBP7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 RBPJQ06330 500 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 ETDBQ3ZM63 59 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 TRGV9Q99603 122 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 NGBQ9NPG2 151 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 AKAP6Q13023 2319 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 H3BMG7 143 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 NDUFB3O43676 98 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 TMEM95Q3KNT9 176 aa7.79□□□□□ -1.16
PTCHD4-202ENST00000398738 NPIPB6E9PJ23 425 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 LEPP41159 167 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 DEFB109BQ30KR1 87 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 SEM1Q6ZVN7 128 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 NEGR1Q7Z3B1 354 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 ARPC1AQ92747 370 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 FOXC2Q99958 501 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 TTC28Q96AY4 2481 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 FAM104BQ5XKR9 115 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 BDP1A6H8Y1 2624 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 SH2D1AO60880 128 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 LGALS9BQ3B8N2 356 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 LGALS9CQ6DKI2 356 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 OR4X2Q8NGF9 303 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 OR9G4Q8NGQ1 327 aa7.78□□□□□ -1.16
PTCHD4-202ENST00000398738 TRBV19A0A075B6N1 114 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 LYNX1G3V0Z9 82 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 LYNX1P0DP58 116 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 HLA-DMBP28068 263 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 ZC2HC1BQ5TFG8 222 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 SIGMAR1Q99720 223 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 SCNM1Q9BWG6 230 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 PTPRZ1P23471 2315 aaPredicted RBP7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 IGKV1-17P01599 117 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 OR5A1Q8NGJ0 315 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 DEFB104AQ8WTQ1 72 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 CHAC1Q9BUX1 264 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 KLK15Q9H2R5 256 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 ARHGAP32A7KAX9 2087 aa7.77□□□□□ -1.17
PTCHD4-202ENST00000398738 IGHG3P01860 377 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 ATP5G2Q06055 141 aa7.76□□□□□ -1.17
PTCHD4-202ENST00000398738 PRSS33Q8NF86 280 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms