RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SSBP4Q9BWG4 385 aaPredicted RBP12.19□□□□□ -0.46
LSS-202ENST00000397728 OSTCQ9NRP0 149 aa12.19□□□□□ -0.46
LSS-202ENST00000397728 IZUMO1RA6ND01 250 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 H3BUA1 57 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 SIRPDQ9H106 197 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 IGLC7A0M8Q6 106 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 IFITM10A6NMD0 228 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 OR9G4Q8NGQ1 327 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 PRSS2P07478 247 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 PAX9P55771 341 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 SRSF3P84103 164 aaKnown RBP12.18□□□□□ -0.46
LSS-202ENST00000397728 ST20Q9HBF5 79 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 A6NDN8 102 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 IGLV1-47P01700 117 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 APOHP02749 345 aaPredicted RBP12.18□□□□□ -0.46
LSS-202ENST00000397728 PAM16Q9Y3D7 125 aa12.18□□□□□ -0.46
LSS-202ENST00000397728 LGALS1P09382 135 aaKnown RBP12.17□□□□□ -0.46
LSS-202ENST00000397728 GSN-AS1Q9NRJ2 163 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 IGLC1P0CG04 106 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 PDE6HQ13956 83 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 RITA1Q96K30 269 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 PRADC1Q9BSG0 188 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 NCKAP5O14513 1909 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 A0A087WX48 190 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 CACNG7P62955 275 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 NUDT10Q8NFP7 164 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 NUDT11Q96G61 164 aa12.17□□□□□ -0.46
LSS-202ENST00000397728 F2Z2F3 143 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 FOLR2P14207 255 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 MEIG1Q5JSS6 88 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 CIDEAO60543 219 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 C1orf194Q5T5A4 169 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 Q8N9W7 124 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 TOMM7Q9P0U1 55 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 C7orf71A4D174 169 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 TMEM170BQ5T4T1 132 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 PSMB2P49721 201 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 FOXE3Q13461 319 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 SCGB3A1Q96QR1 104 aa12.16□□□□□ -0.46
LSS-202ENST00000397728 TRAV1-1A0A0B4J248 108 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 IGHV7-4-1A0A0J9YVY3 117 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 SLURP1P55000 103 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 KNCNA6PVL3 124 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 IGHV4-31P0DP07 118 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 LINC00479Q96M42 142 aa12.15□□□□□ -0.46
LSS-202ENST00000397728 FN1P02751 2386 aaKnown RBP12.15□□□□□ -0.46
LSS-202ENST00000397728 LYPD6Q86Y78 171 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 FNDC4Q9H6D8 234 aaPredicted RBP12.14□□□□□ -0.47
LSS-202ENST00000397728 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 TMEM158Q8WZ71 300 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 C2orf88Q9BSF0 95 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 MTORP42345 2549 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 SH2D1AO60880 128 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 CRPP02741 224 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 NPBQ8NG41 125 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
LSS-202ENST00000397728 LGALS3P17931 250 aaKnown RBP12.13□□□□□ -0.47
LSS-202ENST00000397728 APOC4P55056 127 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 SMIM12Q96EX1 92 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 CLPSL1A2RUU4 121 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 EVI2AP22794 236 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 TMEM190Q8WZ59 177 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 LRP4O75096 1905 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 LYL1P12980 280 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 RPL36AP83881 106 aaKnown RBP12.13□□□□□ -0.47
LSS-202ENST00000397728 PMCHL1Q16048 86 aa12.13□□□□□ -0.47
LSS-202ENST00000397728 RPL36ALQ969Q0 106 aaKnown RBP12.13□□□□□ -0.47
LSS-202ENST00000397728 TCF23Q7RTU1 214 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 HAPLN4Q86UW8 402 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 DEFB104AQ8WTQ1 72 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
LSS-202ENST00000397728 UQCR10Q9UDW1 63 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 TMEM160Q9NX00 188 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 SMPXQ9UHP9 88 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 LYZL1Q6UWQ5 148 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 KLK9Q9UKQ9 250 aa12.12□□□□□ -0.47
LSS-202ENST00000397728 TRAV12-2A0A075B6T6 113 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 CFHR3Q02985 330 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 RPL13AP40429 203 aaKnown RBP12.11□□□□□ -0.47
LSS-202ENST00000397728 PRR31Q5SQ13 230 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 F5H768 121 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 AMBPP02760 352 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 DAD1P61803 113 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 ZNF491Q8N8L2 437 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 AJUBAQ96IF1 538 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 VGLL1Q99990 258 aa12.11□□□□□ -0.47
LSS-202ENST00000397728 IGKV3D-20A0A0C4DH25 116 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 A0A1B0GV90 55 aa12.1□□□□□ -0.47
LSS-202ENST00000397728 TNFRSF13BO14836 293 aaPredicted RBP12.1□□□□□ -0.47
LSS-202ENST00000397728 IFI27P40305 119 aaPredicted RBP12.1□□□□□ -0.47
LSS-202ENST00000397728 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms