RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 ARID2Q68CP9 1835 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 NBL1P41271 181 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 TIMM17AQ99595 171 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 hADV29S1A0JD25 119 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 I3L3M4 83 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 RNF144BQ7Z419 303 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 PNRC2Q9NPJ4 139 aaKnown RBP14□□□□□ -0.17
MCF2L-208ENST00000397030 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 GLRX5Q86SX6 157 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 AGMATQ9BSE5 352 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 RTTNQ86VV8 2226 aa14□□□□□ -0.17
MCF2L-208ENST00000397030 GP9P14770 177 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 CD5LO43866 347 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 RNASE2P10153 161 aaKnown RBP13.99□□□□□ -0.17
MCF2L-208ENST00000397030 LAIR2Q6ISS4 152 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 SHANK2-AS3Q9BTD1 123 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 CDKN1BP46527 198 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 SLURP1P55000 103 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 hDV102S1A0JD36 115 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 ID3Q02535 119 aa13.99□□□□□ -0.17
MCF2L-208ENST00000397030 LINC01549A6NIU2 74 aa13.98□□□□□ -0.17
MCF2L-208ENST00000397030 C17orf82Q86X59 251 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-208ENST00000397030 CCL18P55774 89 aa13.98□□□□□ -0.17
MCF2L-208ENST00000397030 HS3ST6Q96QI5 342 aa13.98□□□□□ -0.17
MCF2L-208ENST00000397030 VPREB3Q9UKI3 123 aa13.98□□□□□ -0.17
MCF2L-208ENST00000397030 CSRP3P50461 194 aa13.98□□□□□ -0.17
MCF2L-208ENST00000397030 A0A087WWC5 75 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 OVOL2Q9BRP0 275 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 HLA-DRB4P13762 266 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 SMPXQ9UHP9 88 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 LAMTOR2Q9Y2Q5 125 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 HLA-DRB4X5D2U9 266 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 HOXB4P17483 251 aaPredicted RBP13.97□□□□□ -0.17
MCF2L-208ENST00000397030 SEC16AO15027 2179 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 TMEM213A2RRL7 107 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 RHODO00212 210 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 GUSBP1Q15486 140 aa13.97□□□□□ -0.17
MCF2L-208ENST00000397030 BCL6BQ8N143 479 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-208ENST00000397030 TIRAPP58753 221 aa13.96□□□□□ -0.17
MCF2L-208ENST00000397030 LINC00479Q96M42 142 aa13.96□□□□□ -0.17
MCF2L-208ENST00000397030 NYNRINQ9P2P1 1898 aaKnown RBP13.96□□□□□ -0.17
MCF2L-208ENST00000397030 Q86TA4 180 aa13.96□□□□□ -0.17
MCF2L-208ENST00000397030 WNK3Q9BYP7 1800 aa13.96□□□□□ -0.18
MCF2L-208ENST00000397030 IGHV4-30-2A0A087WSY4 118 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 GFI1Q99684 422 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 CLPSL1A2RUU4 121 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 NDUFA4O00483 81 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 ZFP36P26651 326 aaKnown RBP13.95□□□□□ -0.18
MCF2L-208ENST00000397030 YLPM1P49750 1951 aaKnown RBP13.95□□□□□ -0.18
MCF2L-208ENST00000397030 K7EM74 188 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 CRLF1O75462 422 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 GREB1Q4ZG55 1949 aa13.95□□□□□ -0.18
MCF2L-208ENST00000397030 INTS1Q8N201 2190 aaKnown RBP13.95□□□□□ -0.18
MCF2L-208ENST00000397030 CHAC1Q9BUX1 264 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 DEFB4AO15263 64 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 SPINK8P0C7L1 97 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 HSD52Q0P140 79 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 H0YIZ8 118 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 CRIPAKQ8N1N5 446 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 ZNF503Q96F45 646 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 TPSG1Q9NRR2 321 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 RALGAPA2Q2PPJ7 1873 aa13.94□□□□□ -0.18
MCF2L-208ENST00000397030 TRAV12-1A0A0B4J245 112 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 C1orf43Q9BWL3 253 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 KLK5Q9Y337 293 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-208ENST00000397030 IGFL3Q6UXB1 125 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 FER1L5A0AVI2 2057 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 LOC105371267A0A1B0GV96 52 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 IGHV4-38-2P0DP08 117 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 LYPD1Q8N2G4 141 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 PLA2G2CQ5R387 149 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 DIAPH2-AS1Q14236 149 aa13.93□□□□□ -0.18
MCF2L-208ENST00000397030 IGLV10-54A0A075B6I4 117 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 BUB3O43684 328 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 MRPL27Q9P0M9 148 aaKnown RBP13.92□□□□□ -0.18
MCF2L-208ENST00000397030 IGHV7-4-1A0A0J9YVY3 117 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 SBF1O95248 1867 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 PFN1P07737 140 aaKnown RBP13.92□□□□□ -0.18
MCF2L-208ENST00000397030 NMSQ5H8A3 153 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 CARHSP1Q9Y2V2 147 aaKnown RBP13.92□□□□□ -0.18
MCF2L-208ENST00000397030 IGHV1-24A0A0C4DH33 117 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 IGLL5B9A064 214 aa13.92□□□□□ -0.18
MCF2L-208ENST00000397030 SRSF8Q9BRL6 282 aaKnown RBP13.92□□□□□ -0.18
MCF2L-208ENST00000397030 U3KQE9 123 aa13.91□□□□□ -0.18
MCF2L-208ENST00000397030 A0A087X0K7 114 aa13.91□□□□□ -0.18
MCF2L-208ENST00000397030 C15orf62A8K5M9 175 aa13.91□□□□□ -0.18
MCF2L-208ENST00000397030 C4orf48Q5BLP8 95 aa13.91□□□□□ -0.18
MCF2L-208ENST00000397030 TICRRQ7Z2Z1 1910 aa13.91□□□□□ -0.18
MCF2L-208ENST00000397030 ELANEP08246 267 aa13.91□□□□□ -0.18
MCF2L-208ENST00000397030 HAMPP81172 84 aa13.9□□□□□ -0.18
MCF2L-208ENST00000397030 CACNA1BQ00975 2339 aa13.9□□□□□ -0.18
MCF2L-208ENST00000397030 F6UB75 175 aa13.9□□□□□ -0.18
MCF2L-208ENST00000397030 LOXP28300 417 aaPredicted RBP13.9□□□□□ -0.18
MCF2L-208ENST00000397030 TMEM14BQ9NUH8 114 aa13.9□□□□□ -0.18
MCF2L-208ENST00000397030 LTBP1Q14766 1721 aa13.9□□□□□ -0.18
MCF2L-208ENST00000397030 IGHV2-5P01817 119 aa13.89□□□□□ -0.19
MCF2L-208ENST00000397030 CRYGCP07315 174 aa13.89□□□□□ -0.19
MCF2L-208ENST00000397030 IGHV4-61A0A0C4DH41 118 aa13.89□□□□□ -0.19
MCF2L-208ENST00000397030 LY6G6FQ5SQ64 297 aa13.89□□□□□ -0.19
MCF2L-208ENST00000397030 TMEM75Q8N9X5 138 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms