RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 MRAPQ8TCY5 172 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 PCSK5Q92824 1860 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 WDR83OSQ9Y284 106 aa6.85□□□□□ -1.31
NDE1-202ENST00000396355 SAA2-SAA4A0A096LPE2 208 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 NPFFO15130 113 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 DPM2O94777 84 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 HLA-DRB4P13762 266 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 ERHP84090 104 aaKnown RBP6.84□□□□□ -1.31
NDE1-202ENST00000396355 FOXB1Q99853 325 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 HLA-DRB4X5D2U9 266 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 CYSRT1A8MQ03 144 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 REG1BP48304 166 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 CEND1Q8N111 149 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 POLDIP2Q9Y2S7 368 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
NDE1-202ENST00000396355 CSDC2Q9Y534 153 aaKnown RBP6.84□□□□□ -1.31
NDE1-202ENST00000396355 IGKV1-27A0A075B6S5 117 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 PROCRQ9UNN8 238 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 TNCP24821 2201 aa6.84□□□□□ -1.31
NDE1-202ENST00000396355 TRBV25-1A0A075B6N4 114 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 C9JCJ5 164 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 RRN3P1Q2M238 152 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 S100A7L2Q5SY68 101 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 C10orf128Q5T292 105 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 TMEM170BQ5T4T1 132 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 C2orf82Q6UX34 121 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 TMEM14EPQ6UXP3 125 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 Q6ZPA2 131 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 SRXN1Q9BYN0 137 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 F8P00451 2351 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 OOSP1A8MZH6 123 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 RBP4P02753 201 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 COX6CP09669 75 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 DSCR4P56555 118 aaPredicted RBP6.83□□□□□ -1.32
NDE1-202ENST00000396355 FOXE3Q13461 319 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 Q6ZR03 302 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 FOXL2NBQ6ZUU3 175 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 ORMDL3Q8N138 153 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 LEAP2Q969E1 77 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 TMEM54Q969K7 222 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 ZNF747Q9BV97 191 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 SIGLEC8Q9NYZ4 499 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 IDI2-AS1Q9NZ38 188 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 IGHV1-45A0A0A0MS14 117 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 SLC25A20O43772 301 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 COX6A1P12074 109 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 MGST2Q99735 147 aa6.83□□□□□ -1.32
NDE1-202ENST00000396355 FAM90A26D6RGX4 464 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 ZNF146Q15072 292 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 Q6ZSR3 168 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 C2orf91Q6ZV80 131 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 TCF19Q9Y242 345 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 COL12A1Q99715 3063 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 IGHV3-64A0A075B6Q5 118 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 TRAV41A0A0B4J266 112 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 NPC2P61916 151 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 DAZAP2Q15038 168 aaPredicted RBP6.82□□□□□ -1.32
NDE1-202ENST00000396355 ZFP2Q6ZN57 461 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 FAM19A5Q7Z5A7 132 aaPredicted RBP6.82□□□□□ -1.32
NDE1-202ENST00000396355 MOB3BQ86TA1 216 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 AMN1Q8IY45 258 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 GTSF1Q8WW33 167 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 IMMP1LQ96LU5 166 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 WNK1Q9H4A3 2382 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 FAM106CPP0CH98 169 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 MLANAQ16655 118 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 FAM106AQ4KMX7 169 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 OR9G1Q8NH87 305 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 TMEM126AQ9H061 195 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 CALYQ9NYX4 217 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 COL27A1Q8IZC6 1860 aaPredicted RBP6.82□□□□□ -1.32
NDE1-202ENST00000396355 TRGV8A0A0C4DH27 118 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 ARMS2P0C7Q2 107 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 CRYGSP22914 178 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 HOXA4Q00056 320 aaPredicted RBP6.82□□□□□ -1.32
NDE1-202ENST00000396355 IGF2-ASQ6U949 168 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 TEN1Q86WV5 123 aa6.82□□□□□ -1.32
NDE1-202ENST00000396355 FAM53AQ6NSI3 398 aaPredicted RBP6.81□□□□□ -1.32
NDE1-202ENST00000396355 Q6ZQT7 251 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 JMJD1CQ15652 2540 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 AGRNO00468 2067 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 MALRD1Q5VYJ5 2156 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 TMEM30CPA0ZSE6 113 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 TRACP01848 142 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 CD7P09564 240 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 HERVK_113P63121 156 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 MORN5Q5VZ52 161 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 RPRMLQ8N4K4 120 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 PRADC1Q9BSG0 188 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 SPRY4Q9C004 299 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 PTPRBP23467 1997 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 TRAV25A0A0B4J276 109 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
NDE1-202ENST00000396355 GCSAMQ8N6F7 178 aa6.81□□□□□ -1.32
NDE1-202ENST00000396355 HCFC1P51610 2035 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 CGB1A6NKQ9 187 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 SYNGR3O43761 229 aa6.8□□□□□ -1.32
NDE1-202ENST00000396355 TFF1P04155 84 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms