RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SH2D6Q7Z4S9 175 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 ABHD12Q8N2K0 398 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 OR10X1Q8NGY0 326 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 SPATA25Q9BR10 227 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 MAP1LC3CQ9BXW4 147 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 MRPL20Q9BYC9 149 aaKnown RBP4.23□□□□□ -1.73
VPS41-203ENST00000395969 TMEM89A2RUT3 159 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 FCGR3BO75015 233 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 ATP5J2P56134 94 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 FHL3Q13643 280 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 VMA21Q3ZAQ7 101 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 C3orf56Q8N813 242 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 ZNF355PQ9NSJ1 428 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 SIGLEC9Q9Y336 463 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 DMXL1Q9Y485 3027 aa4.23□□□□□ -1.73
VPS41-203ENST00000395969 IGHV3-64DA0A0J9YX35 117 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 GAGE12HA6NDE8 117 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 SIVA1O15304 175 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 KIR3DS1Q14943 382 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 CD300EQ496F6 205 aaPredicted RBP4.22□□□□□ -1.73
VPS41-203ENST00000395969 ADAMTSL5Q6ZMM2 481 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 TPRX1Q8N7U7 411 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 C10orf105Q8TEF2 133 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 INSIG2Q9Y5U4 225 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 CFAP47Q6ZTR5 3102 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 ROS1P08922 2347 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 AKAP13Q12802 2813 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 IGKV1D-37A0A075B6S9 117 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 HIGD1CA8MV81 97 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 SUB1P53999 127 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS41-203ENST00000395969 ETDBQ3ZM63 59 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 SFTA2Q6UW10 78 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 LCNL1Q6ZST4 164 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 LINC01560Q8TB33 94 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 SGK494Q96LW2 274 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 NDFIP1Q9BT67 221 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 DPM3Q9P2X0 92 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 RABAC1Q9UI14 185 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 TNCP24821 2201 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 IGKV1-16P04430 117 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 ID1P41134 155 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 HBBP68871 147 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 EDDM3AQ14507 147 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 FAM53AQ6NSI3 398 aaPredicted RBP4.22□□□□□ -1.73
VPS41-203ENST00000395969 ZNF414Q96IQ9 312 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 PLEKHA3Q9HB20 300 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 HSPB8Q9UJY1 196 aa4.22□□□□□ -1.73
VPS41-203ENST00000395969 SOX21Q9Y651 276 aaPredicted RBP4.22□□□□□ -1.73
VPS41-203ENST00000395969 A0A0U1RRA0 63 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 I3L2K1 104 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 SLC25A16P16260 332 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 INSL3P51460 131 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 LINC00205P59089 165 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 FAM201AQ5SY85 155 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 OR9G4Q8NGQ1 327 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 KLF12Q9Y4X4 402 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 MOSP00540 346 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 TFF1P04155 84 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 RPL11P62913 178 aaKnown RBP4.21□□□□□ -1.74
VPS41-203ENST00000395969 AMTNQ6UX39 209 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 ZNF562Q6V9R5 426 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 LYPD1Q8N2G4 141 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 RNF183Q96D59 192 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 ASPMQ8IZT6 3477 aa4.21□□□□□ -1.74
VPS41-203ENST00000395969 TRAV3A0A0B4J244 114 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 WI2-2373I1.2A0A1W2PRP0 233 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 TCRBV4S1A1TA0A5B7 111 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 K7ERJ3 54 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 CCL3L1P16619 93 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 TAS2R45P59539 299 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 ERHP84090 104 aaKnown RBP4.2□□□□□ -1.74
VPS41-203ENST00000395969 WFDC2Q14508 124 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 FA2HQ7L5A8 372 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 ARPC1AQ92747 370 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 FAM167A-AS1Q96KT0 104 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 LINC00479Q96M42 142 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 PRSS22Q9GZN4 317 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 SIGLEC8Q9NYZ4 499 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 WNK2Q9Y3S1 2297 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 IGLV11-55A0A075B6I3 123 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 IGHV3-43A0A0B4J1X8 118 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 IGHV3-43DP0DP04 118 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 FXYD7P58549 80 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 HOXA4Q00056 320 aaPredicted RBP4.2□□□□□ -1.74
VPS41-203ENST00000395969 WT1-ASQ06250 92 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 LOXL1Q08397 574 aaPredicted RBP4.2□□□□□ -1.74
VPS41-203ENST00000395969 MRPL23Q16540 153 aaKnown RBP4.2□□□□□ -1.74
VPS41-203ENST00000395969 GATD1Q8NB37 220 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 OR4X2Q8NGF9 303 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 RFESDQ8TAC1 157 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 CCL17Q92583 94 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 HARBI1Q96MB7 349 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 SLC25A33Q9BSK2 321 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 POLEQ07864 2286 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 CACNA1AO00555 2505 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 IGKV1OR2-108A0A075B7D4 117 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 NCR2O95944 276 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 IGF1P05019 195 aa4.2□□□□□ -1.74
VPS41-203ENST00000395969 C8orf88P0DMB2 117 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms