RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 IGKV2-40A0A087WW87 121 aaPredicted RBP11.03□□□□□ -0.64
MKS1-203ENST00000393120 IGKV2D-40P01614 121 aaPredicted RBP11.03□□□□□ -0.64
MKS1-203ENST00000393120 PPIFP30405 207 aaKnown RBP11.03□□□□□ -0.64
MKS1-203ENST00000393120 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
MKS1-203ENST00000393120 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.03□□□□□ -0.64
MKS1-203ENST00000393120 TEX43Q6ZNM6 134 aa11.03□□□□□ -0.64
MKS1-203ENST00000393120 USMG5Q96IX5 58 aa11.03□□□□□ -0.64
MKS1-203ENST00000393120 ABCA2Q9BZC7 2435 aa11.03□□□□□ -0.64
MKS1-203ENST00000393120 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
MKS1-203ENST00000393120 H3BUX3 64 aa11.02□□□□□ -0.65
MKS1-203ENST00000393120 TRGV3P03979 118 aa11.02□□□□□ -0.65
MKS1-203ENST00000393120 SRSF2Q01130 221 aaKnown RBP11.02□□□□□ -0.65
MKS1-203ENST00000393120 REC114Q7Z4M0 266 aa11.02□□□□□ -0.65
MKS1-203ENST00000393120 MRPL53Q96EL3 112 aaKnown RBP11.02□□□□□ -0.65
MKS1-203ENST00000393120 ZNF705FA8MVS1 300 aaPredicted RBP11.01□□□□□ -0.65
MKS1-203ENST00000393120 ZNF705DP0CH99 300 aaPredicted RBP11.01□□□□□ -0.65
MKS1-203ENST00000393120 ZNF705BP0CI00 300 aaPredicted RBP11.01□□□□□ -0.65
MKS1-203ENST00000393120 CD33P20138 364 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 BMI1P35226 326 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 CYB5R2Q6BCY4 276 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 NIT1Q86X76 327 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 C14orf144Q96I85 54 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 ASCL2Q99929 193 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 VGLL1Q99990 258 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 CFAP46Q8IYW2 2715 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.01□□□□□ -0.65
MKS1-203ENST00000393120 KIR2DL5BA0A0G2JN68 375 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 KIR2DL5BA0A0G2JPC4 375 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 TMEM189A5PLL7 270 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 SH2D1AO60880 128 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 PMCHP20382 165 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 RPS20P60866 119 aaKnown RBP11.01□□□□□ -0.65
MKS1-203ENST00000393120 KIR2DL5AQ8N109 375 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 ZNF580Q9UK33 172 aa11.01□□□□□ -0.65
MKS1-203ENST00000393120 A0A096LNT2 108 aa11□□□□□ -0.65
MKS1-203ENST00000393120 AVPP01185 164 aa11□□□□□ -0.65
MKS1-203ENST00000393120 COX6B1P14854 86 aa11□□□□□ -0.65
MKS1-203ENST00000393120 FAM209BQ5JX69 171 aa11□□□□□ -0.65
MKS1-203ENST00000393120 LINC01356Q8N9X3 169 aa11□□□□□ -0.65
MKS1-203ENST00000393120 BBC3Q96PG8 261 aaPredicted RBP11□□□□□ -0.65
MKS1-203ENST00000393120 NDUFAF3Q9BU61 184 aa11□□□□□ -0.65
MKS1-203ENST00000393120 CLEC5AQ9NY25 188 aa11□□□□□ -0.65
MKS1-203ENST00000393120 HSBP1O75506 76 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 ARMS2P0C7Q2 107 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 HLA-DMBP28068 263 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 ARL3P36405 182 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 LY6EQ16553 131 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 IGFL4Q6B9Z1 124 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 ZNF493Q6ZR52 646 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 Q8N976 141 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 BORCS7Q96B45 105 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
MKS1-203ENST00000393120 ZMAT5Q9UDW3 170 aaKnown RBP10.99□□□□□ -0.65
MKS1-203ENST00000393120 LINC00527Q9UJ94 153 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 IGSF10Q6WRI0 2623 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 J3QLI3 93 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 NDUFA4O00483 81 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 PRB1P04280 392 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 KRTDAPP60985 99 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 FAM19A2Q8N3H0 131 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 ZNF843Q8N446 348 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 NRGNQ92686 78 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 RNF114Q9Y508 228 aa10.99□□□□□ -0.65
MKS1-203ENST00000393120 IGLV1-40P01703 118 aa10.98□□□□□ -0.65
MKS1-203ENST00000393120 PRB4P10163 310 aaPredicted RBP10.98□□□□□ -0.65
MKS1-203ENST00000393120 URB1-AS1Q96HZ7 61 aa10.98□□□□□ -0.65
MKS1-203ENST00000393120 C20orf144Q9BQM9 153 aa10.98□□□□□ -0.65
MKS1-203ENST00000393120 TRAV8-2A0A0B4J237 113 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 FOSL1P15407 271 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 BLCAPP62952 87 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 RNASEKQ6P5S7 137 aaKnown RBP10.97□□□□□ -0.65
MKS1-203ENST00000393120 GLMPQ8WWB7 406 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 PPP1R14DQ9NXH3 145 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 ACACBO00763 2458 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 SPTAN1Q13813 2472 aaKnown RBP10.97□□□□□ -0.65
MKS1-203ENST00000393120 FABP5P3A8MUU1 101 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 PRAC2D3DTV9 90 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 RAB4AP20338 218 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 NTF3P20783 257 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 ZNF80P51504 273 aaPredicted RBP10.97□□□□□ -0.65
MKS1-203ENST00000393120 SRSF1Q07955 248 aaKnown RBP eCLIP10.97□□□□□ -0.65
MKS1-203ENST00000393120 C8orf86Q6ZUL3 223 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 Q8TAT8 98 aa10.97□□□□□ -0.65
MKS1-203ENST00000393120 IGHV3-66A0A0C4DH42 116 aa10.96□□□□□ -0.65
MKS1-203ENST00000393120 A0A0G2JLM5 398 aa10.96□□□□□ -0.65
MKS1-203ENST00000393120 CTRLP40313 264 aa10.96□□□□□ -0.65
MKS1-203ENST00000393120 CFHR3Q02985 330 aa10.96□□□□□ -0.65
MKS1-203ENST00000393120 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
MKS1-203ENST00000393120 FAM181BA6NEQ2 426 aa10.96□□□□□ -0.66
MKS1-203ENST00000393120 M0R2Z0 102 aa10.96□□□□□ -0.66
MKS1-203ENST00000393120 ZNF207O43670 478 aaKnown RBP10.96□□□□□ -0.66
MKS1-203ENST00000393120 IGLC6P0CF74 106 aa10.96□□□□□ -0.66
MKS1-203ENST00000393120 ZNF575Q86XF7 245 aa10.96□□□□□ -0.66
MKS1-203ENST00000393120 RNF182Q8N6D2 247 aa10.96□□□□□ -0.66
MKS1-203ENST00000393120 PSMG3-AS1Q96PY0 264 aa10.96□□□□□ -0.66
MKS1-203ENST00000393120 IGHV3OR16-13A0A075B7E8 117 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 IGHV3-74A0A0B4J1X5 117 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 LINC00614P0C842 121 aa10.95□□□□□ -0.66
MKS1-203ENST00000393120 LOXL1Q08397 574 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms