RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 C12orf54Q6X4T0 127 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 PPP1R17O96001 155 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 PDE6HQ13956 83 aa10.37□□□□□ -0.75
PTPRN2-202ENST00000389416 UTF1Q5T230 341 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 TTC9CQ8N5M4 171 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 ARHGAP21Q5T5U3 1957 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 TCF21O43680 179 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 ELANEP08246 267 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 CXCL1P09341 107 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 ADMP35318 185 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 RIPPLY3P57055 190 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 TRGV11A0A075B6L2 103 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 SH2D1AO60880 128 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 EVI2AP22794 236 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 LYZL1Q6UWQ5 148 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 GEMIN7Q9H840 131 aaKnown RBP10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 KIAA1549Q9HCM3 1950 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 CHD9Q3L8U1 2897 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 TRBV19A0A075B6N1 114 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 TRGV4A0A0C4DH28 118 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 NDUFA4O00483 81 aa10.36□□□□□ -0.75
PTPRN2-202ENST00000389416 SERF1AO75920 110 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 DEFB136Q30KP8 78 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 OR10J3Q5JRS4 329 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 F2Z2F3 143 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 CMC4P56277 68 aaPredicted RBP10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 Q6ZPA2 131 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 ODF3L1Q8IXM7 274 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 ZNF491Q8N8L2 437 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 Q8N9W7 124 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 DEFB104AQ8WTQ1 72 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 PRDM13Q9H4Q3 707 aa10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 RPLP1P05386 114 aaKnown RBP10.35□□□□□ -0.75
PTPRN2-202ENST00000389416 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 PMCHL1Q16048 86 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 IGHV3-73A0A0B4J1V6 119 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 Q86TA4 180 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 SLC25A2Q9BXI2 301 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 FLNBO75369 2602 aaKnown RBP10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 NCR2O95944 276 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 IGLV2-14P01704 120 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 C8orf86Q6ZUL3 223 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 ZNF414Q96IQ9 312 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 SIRPDQ9H106 197 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 PROP1O75360 226 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 PRSS2P07478 247 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 XCL2Q9UBD3 114 aa10.34□□□□□ -0.75
PTPRN2-202ENST00000389416 NACAE9PAV3 2078 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 PRR20EP86478 221 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 PRR20CP86479 221 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 PRR20DP86480 221 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 PRR20BP86481 221 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 PRR20AP86496 221 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 SPINK13Q1W4C9 94 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 SPATA45Q537H7 98 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 TMEM170BQ5T4T1 132 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 BCL6BQ8N143 479 aaPredicted RBP10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 MIEN1Q9BRT3 115 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 TRBV24-1A0A075B6N3 115 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 SUMO2P61956 95 aaKnown RBP10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 TMEM170AQ8WVE7 144 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 TMEM70Q9BUB7 260 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 TRGV1A0A0A0MS02 117 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 CRXO43186 299 aaPredicted RBP10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 EML5Q05BV3 1969 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 IGHV3-53P01767 116 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 CGB3P0DN86 165 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 CGB7P0DN87 165 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 THAP8Q8NA92 274 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 ST20Q9HBF5 79 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 TMEM242Q9NWH2 141 aa10.33□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BKO60814 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BJP06899 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BOP23527 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BBP33778 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BDP58876 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BCP62807 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST2H2BEQ16778 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 C1orf194Q5T5A4 169 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 GFI1BQ5VTD9 330 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 NPBQ8NG41 125 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BHQ93079 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BNQ99877 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 HIST1H2BMQ99879 126 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 E7EUB6 86 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 H3BRN7 92 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 CACNG7P62955 275 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 FOXL1Q12952 345 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 NUP35Q8NFH5 326 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 DMRT1Q9Y5R6 373 aa10.32□□□□□ -0.76
PTPRN2-202ENST00000389416 COLCA2A8K830 154 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 GNB1LQ9BYB4 327 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 K7EIM0 57 aa10.31□□□□□ -0.76
PTPRN2-202ENST00000389416 SNCGO76070 127 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms