RNA–Protein interactions for RNA: ENST00000382361.7

FSCN1-201, Transcript of fascin actin-bundling protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FSCN1, Length 2,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-201ENST00000382361 FAM106CPP0CH98 169 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 IFI27P40305 119 aaPredicted RBP13.24□□□□□ -0.29
FSCN1-201ENST00000382361 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 DYNAPQ8N1N2 210 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 NCR2O95944 276 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 NUDT3O95989 172 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 PCP4P48539 62 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 FAM104BQ5XKR9 115 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 Q8N6K4 173 aa13.24□□□□□ -0.29
FSCN1-201ENST00000382361 IGHV3-23P01764 117 aa13.23□□□□□ -0.29
FSCN1-201ENST00000382361 RPL7P18124 248 aaKnown RBP13.23□□□□□ -0.29
FSCN1-201ENST00000382361 LOXL1Q08397 574 aaPredicted RBP13.23□□□□□ -0.29
FSCN1-201ENST00000382361 FOXC1Q12948 553 aa13.23□□□□□ -0.29
FSCN1-201ENST00000382361 CDSNQ15517 529 aa13.23□□□□□ -0.29
FSCN1-201ENST00000382361 SIGLEC8Q9NYZ4 499 aa13.23□□□□□ -0.29
FSCN1-201ENST00000382361 AMN1Q8IY45 258 aa13.23□□□□□ -0.29
FSCN1-201ENST00000382361 PRR25Q96S07 402 aa13.23□□□□□ -0.29
FSCN1-201ENST00000382361 HRNRQ86YZ3 2850 aaPredicted RBP13.23□□□□□ -0.29
FSCN1-201ENST00000382361 IGHV2-70DA0A0C4DH43 119 aa13.22□□□□□ -0.29
FSCN1-201ENST00000382361 OR2T8A6NH00 312 aa13.22□□□□□ -0.29
FSCN1-201ENST00000382361 NCBP2LA6PVI3 153 aaKnown RBP13.22□□□□□ -0.29
FSCN1-201ENST00000382361 C11orf71Q6IPW1 123 aa13.22□□□□□ -0.29
FSCN1-201ENST00000382361 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
FSCN1-201ENST00000382361 VMO1Q7Z5L0 202 aa13.22□□□□□ -0.29
FSCN1-201ENST00000382361 THYN1Q9P016 225 aa13.22□□□□□ -0.29
FSCN1-201ENST00000382361 CCDC144NLQ6NUI1 221 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 C12orf54Q6X4T0 127 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 ORMDL3Q8N138 153 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 PRELID3AQ96N28 172 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 CCL21O00585 134 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 TAX1BP3O14907 124 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 CTSGP08311 255 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 EGR2P11161 476 aaPredicted RBP13.21□□□□□ -0.29
FSCN1-201ENST00000382361 SMAD5-AS1Q9Y6J3 95 aa13.21□□□□□ -0.29
FSCN1-201ENST00000382361 MUC21A0A0G2JKD1 596 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 MUC21A0A140T8X8 626 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 IGHG4P01861 327 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 COX8AP10176 69 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 HIST1H1AQ02539 215 aaPredicted RBP13.2□□□□□ -0.3
FSCN1-201ENST00000382361 EBI3Q14213 229 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 MUC21Q5SSG8 566 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 DEFB125Q8N687 156 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 Q8TAT8 98 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 ABCA4P78363 2273 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 FBLL1A6NHQ2 334 aaKnown RBP13.2□□□□□ -0.3
FSCN1-201ENST00000382361 ZNF80P51504 273 aaPredicted RBP13.2□□□□□ -0.3
FSCN1-201ENST00000382361 MRPL51Q4U2R6 128 aaKnown RBP13.2□□□□□ -0.3
FSCN1-201ENST00000382361 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 CEP295Q9C0D2 2601 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 PIP4P2Q8N4L2 257 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 VGLL1Q99990 258 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 CBY1Q9Y3M2 126 aa13.2□□□□□ -0.3
FSCN1-201ENST00000382361 PTPRQQ9UMZ3 2332 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 A0A087X0K7 114 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 OOSP1A8MZH6 123 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 PAX8Q06710 450 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 C2orf91Q6ZV80 131 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 ADORA2A-AS1P86434 159 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 ZNF575Q86XF7 245 aa13.19□□□□□ -0.3
FSCN1-201ENST00000382361 IGHV7-81A0A0B4J1V7 117 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 IGLC6P0CF74 106 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 NHLH1Q02575 133 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 IGFL4Q6B9Z1 124 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 OR8A1Q8NGG7 326 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 SCGB2A1O75556 95 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 TMEM11P17152 192 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 HLA-DMBP28068 263 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 RPS20P60866 119 aaKnown RBP13.18□□□□□ -0.3
FSCN1-201ENST00000382361 MINOS1Q5TGZ0 78 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 FER1L6-AS1Q8NA97 138 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 MINOS1-NBL1R4GNA1 71 aa13.18□□□□□ -0.3
FSCN1-201ENST00000382361 FOXE3Q13461 319 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 PSMG3-AS1Q96PY0 264 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 K7EP13 123 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 GPR183P32249 361 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 RHOGP84095 191 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 ERASQ7Z444 233 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
FSCN1-201ENST00000382361 DPF1Q92782 380 aa13.17□□□□□ -0.3
FSCN1-201ENST00000382361 BMI1P35226 326 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 VAMP3Q15836 100 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 HBDP02042 147 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 FGF6P10767 208 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 TWIST1Q15672 202 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 LGALS9BQ3B8N2 356 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 LGALS9CQ6DKI2 356 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 Q8N9W7 124 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 MSRB2Q9Y3D2 182 aa13.16□□□□□ -0.3
FSCN1-201ENST00000382361 NPYP01303 97 aa13.15□□□□□ -0.3
FSCN1-201ENST00000382361 ZFP36P26651 326 aaKnown RBP13.15□□□□□ -0.3
FSCN1-201ENST00000382361 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
FSCN1-201ENST00000382361 OR4C5Q8NGB2 326 aa13.15□□□□□ -0.3
FSCN1-201ENST00000382361 SMKR1H3BMG3 65 aa13.15□□□□□ -0.3
FSCN1-201ENST00000382361 CKS2P33552 79 aa13.15□□□□□ -0.31
FSCN1-201ENST00000382361 FXYD7P58549 80 aa13.15□□□□□ -0.31
FSCN1-201ENST00000382361 IGHV3-35A0A0C4DH35 117 aa13.14□□□□□ -0.31
FSCN1-201ENST00000382361 CD5LO43866 347 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms