RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 VMO1Q7Z5L0 202 aa12.21□□□□□ -0.45
EXT1-201ENST00000378204 SCRT1Q9BWW7 348 aa12.21□□□□□ -0.45
EXT1-201ENST00000378204 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
EXT1-201ENST00000378204 ZC2HC1BQ5TFG8 222 aa12.21□□□□□ -0.46
EXT1-201ENST00000378204 JPT2Q9H910 190 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 PSPNO60542 156 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 H3BMG7 143 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 EFNA4P52798 201 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 NMSQ5H8A3 153 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 D6R8Y8 96 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 RCHY1Q96PM5 261 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 IGHV3-64A0A075B6Q5 118 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 SRRM4A7MD48 611 aaKnown RBP12.2□□□□□ -0.46
EXT1-201ENST00000378204 C11orf44Q8N8P7 122 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 TMEM219Q86XT9 240 aa12.2□□□□□ -0.46
EXT1-201ENST00000378204 IGKV1-27A0A075B6S5 117 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 SIVA1O15304 175 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 LILRA1O75019 489 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 C20orf204Q6ZNR8 217 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 A0A0U1RRA0 63 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 MST1P26927 711 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 DENND4AQ7Z401 1863 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 PLXNA4Q9HCM2 1894 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 LY6DQ14210 128 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 C10orf55Q5SWW7 151 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 RPP25LQ8N5L8 163 aaKnown RBP12.19□□□□□ -0.46
EXT1-201ENST00000378204 TAL2Q16559 108 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 C5orf64Q2M2E5 130 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 LINC00527Q9UJ94 153 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 RPL36AP83881 106 aaKnown RBP12.19□□□□□ -0.46
EXT1-201ENST00000378204 TMEM14EPQ6UXP3 125 aa12.19□□□□□ -0.46
EXT1-201ENST00000378204 RPL36ALQ969Q0 106 aaKnown RBP12.19□□□□□ -0.46
EXT1-201ENST00000378204 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
EXT1-201ENST00000378204 TRAV13-1A0A0B4J241 112 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 M0R1W7 72 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 USMG5Q96IX5 58 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 KLF2Q9Y5W3 355 aaPredicted RBP12.18□□□□□ -0.46
EXT1-201ENST00000378204 LYPD1Q8N2G4 141 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 ADCYAP1P18509 176 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 VCYO14598 125 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 NSUN5P1Q3KNT7 163 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 TEX43Q6ZNM6 134 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 CD59P13987 128 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 CDK2AP2O75956 126 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 LYL1P12980 280 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 C9orf139Q6ZV77 190 aa12.18□□□□□ -0.46
EXT1-201ENST00000378204 ZNF876PQ49A33 203 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 DPH3P1Q9H4G8 78 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 EFNA2O43921 213 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 TCF15Q12870 199 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 Q8NFD4 153 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 TRBV6-6A0A0A6YYG2 114 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 C3orf36Q3SXR2 165 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 ANXA2RQ3ZCQ2 193 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 B4DSR2 109 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 H0YJW9 148 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 SAP30O75446 220 aa12.17□□□□□ -0.46
EXT1-201ENST00000378204 ZNF625Q96I27 306 aaPredicted RBP12.17□□□□□ -0.46
EXT1-201ENST00000378204 NUP35Q8NFH5 326 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 TEX48A0A1B0GUV7 120 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 FOXG1P55316 489 aaPredicted RBP12.16□□□□□ -0.46
EXT1-201ENST00000378204 BUB1B-PAK6H3BSN5 160 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 PAX4O43316 350 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 IGKV1-5P01602 117 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 TCRAP04437 139 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 LYZL1Q6UWQ5 148 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 CEND1Q8N111 149 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 CYTL1Q9NRR1 136 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 CD177Q8N6Q3 437 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 OR11H6Q8NGC7 330 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 SIGLEC9Q9Y336 463 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 KLRD1Q13241 179 aa12.16□□□□□ -0.46
EXT1-201ENST00000378204 PNRC2Q9NPJ4 139 aaKnown RBP12.16□□□□□ -0.46
EXT1-201ENST00000378204 HLA-DMBP28068 263 aa12.15□□□□□ -0.46
EXT1-201ENST00000378204 NLRC5Q86WI3 1866 aa12.15□□□□□ -0.46
EXT1-201ENST00000378204 H3BUX3 64 aa12.15□□□□□ -0.46
EXT1-201ENST00000378204 U3KQE9 123 aa12.15□□□□□ -0.46
EXT1-201ENST00000378204 TRGV1A0A0A0MS02 117 aa12.15□□□□□ -0.47
EXT1-201ENST00000378204 CRIPAKQ8N1N5 446 aa12.15□□□□□ -0.47
EXT1-201ENST00000378204 SPATA31B1PQ5VZV4 182 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 ATP5G1P05496 136 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
EXT1-201ENST00000378204 C17orf82Q86X59 251 aaPredicted RBP12.14□□□□□ -0.47
EXT1-201ENST00000378204 CSPG4Q6UVK1 2322 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 KIR2DL5BA0A0G2JN68 375 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 KIR2DL5BA0A0G2JPC4 375 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 MYMXA0A1B0GTQ4 84 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 FGF6P10767 208 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 KIR2DL5AQ8N109 375 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 DEFB125Q8N687 156 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 RPL32P62910 135 aaKnown RBP12.14□□□□□ -0.47
EXT1-201ENST00000378204 C8orf86Q6ZUL3 223 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 G3V4G9 280 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 PRO1854Q9UHT4 67 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 RFNGQ9Y644 331 aa12.14□□□□□ -0.47
EXT1-201ENST00000378204 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
EXT1-201ENST00000378204 SUMO4Q6EEV6 95 aa12.13□□□□□ -0.47
EXT1-201ENST00000378204 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms