RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
GNE-201ENST00000377902 GAS8-AS1O95177 125 aa14.11□□□□□ -0.15
GNE-201ENST00000377902 PPIAL4GP0DN37 164 aa14.11□□□□□ -0.15
GNE-201ENST00000377902 PCP2Q8IVA1 136 aa14.11□□□□□ -0.15
GNE-201ENST00000377902 GAGE10A6NGK3 116 aa14.11□□□□□ -0.15
GNE-201ENST00000377902 PRRG2O14669 202 aa14.11□□□□□ -0.15
GNE-201ENST00000377902 H3BUT2 72 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 NPYP01303 97 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 ORMDL3Q8N138 153 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 MSRB1Q9NZV6 116 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 ABCA4P78363 2273 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 RIF1Q5UIP0 2472 aaKnown RBP14.1□□□□□ -0.15
GNE-201ENST00000377902 NPIPB5A8MRT5 1133 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 EGR2P11161 476 aaPredicted RBP14.1□□□□□ -0.15
GNE-201ENST00000377902 HLA-DMBP28068 263 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 ZNF80P51504 273 aaPredicted RBP14.1□□□□□ -0.15
GNE-201ENST00000377902 GFRALQ6UXV0 394 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 TNFRSF14Q92956 283 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 C18orf15Q96N68 181 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 ONECUT1Q9UBC0 465 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 DKK2Q9UBU2 259 aa14.1□□□□□ -0.15
GNE-201ENST00000377902 LY6HO94772 140 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 NMUP48645 174 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 TM4SF20Q53R12 229 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 ZFHX3Q15911 3703 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 GNG7O60262 68 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 RPS20P60866 119 aaKnown RBP14.09□□□□□ -0.15
GNE-201ENST00000377902 TWIST1Q15672 202 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 U3KQK5 164 aa14.09□□□□□ -0.15
GNE-201ENST00000377902 IGHV3-35A0A0C4DH35 117 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 A0A1B0GW15 77 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 WI2-2373I1.2A0A1W2PRP0 233 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 PAX8Q06710 450 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 BOD1L2Q8IYS8 172 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 LYPD1Q8N2G4 141 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 ZNF292O60281 2723 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 LY6LH3BQJ8 138 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 CKS2P33552 79 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 SEC11AP67812 179 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 ZNF575Q86XF7 245 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 VGLL1Q99990 258 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 AAMDCQ9H7C9 122 aa14.08□□□□□ -0.16
GNE-201ENST00000377902 KIR3DS1Q14943 382 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 Q6AWC8 147 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 TTTY13Q9BZ97 58 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 MEGF9Q9H1U4 602 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 WNK2Q9Y3S1 2297 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 KLRD1Q13241 179 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 LGALS9BQ3B8N2 356 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 PRR30Q53SZ7 412 aaPredicted RBP14.07□□□□□ -0.16
GNE-201ENST00000377902 LGALS9CQ6DKI2 356 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 IFI27L1Q96BM0 104 aa14.07□□□□□ -0.16
GNE-201ENST00000377902 VSTM5A8MXK1 200 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 F8W735 103 aaPredicted RBP14.06□□□□□ -0.16
GNE-201ENST00000377902 SMAD7O15105 426 aaKnown RBP14.06□□□□□ -0.16
GNE-201ENST00000377902 HBDP02042 147 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 RIPPLY3P57055 190 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 UFSP1Q6NVU6 142 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 C9orf118A6NHY6 69 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 NDUFS7O75251 213 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 FANCD2OSQ96PS1 177 aa14.06□□□□□ -0.16
GNE-201ENST00000377902 A1L4Q6 167 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 HES1Q14469 280 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 ADAMTSL5Q6ZMM2 481 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 ABHD17AQ96GS6 310 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 PRR25Q96S07 402 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 JKAMPQ9P055 326 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 NBR2O15453 112 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 PPIFP30405 207 aaKnown RBP14.05□□□□□ -0.16
GNE-201ENST00000377902 ARL6IP6Q8N6S5 226 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 AP1S3Q96PC3 154 aa14.05□□□□□ -0.16
GNE-201ENST00000377902 ZFHX2Q9C0A1 2572 aaPredicted RBP14.04□□□□□ -0.16
GNE-201ENST00000377902 MED13LQ71F56 2210 aa14.04□□□□□ -0.16
GNE-201ENST00000377902 A0A0G2JLM5 398 aa14.04□□□□□ -0.16
GNE-201ENST00000377902 H3BRM9 83 aa14.04□□□□□ -0.16
GNE-201ENST00000377902 EVI2AP22794 236 aa14.04□□□□□ -0.16
GNE-201ENST00000377902 FER1L6-AS1Q8NA97 138 aa14.04□□□□□ -0.16
GNE-201ENST00000377902 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.03□□□□□ -0.16
GNE-201ENST00000377902 GATA1P15976 413 aaPredicted RBP14.03□□□□□ -0.16
GNE-201ENST00000377902 NDPQ00604 133 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 CACNA1BQ00975 2339 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 IGKV2D-26A0A0A0MRZ7 120 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 K7ERU9 68 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 IGHG4P01861 327 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 OR1N2Q8NGR9 330 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 LINC01560Q8TB33 94 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 CSTL1Q9H114 145 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 SMAD5-AS1Q9Y6J3 95 aa14.03□□□□□ -0.16
GNE-201ENST00000377902 A6NDN8 102 aa14.02□□□□□ -0.16
GNE-201ENST00000377902 Q8NA96 180 aa14.02□□□□□ -0.16
GNE-201ENST00000377902 K7EMI3 77 aa14.02□□□□□ -0.17
GNE-201ENST00000377902 ERCC8Q13216 396 aa14.02□□□□□ -0.17
GNE-201ENST00000377902 CFHR4Q92496 578 aa14.02□□□□□ -0.17
GNE-201ENST00000377902 DPF1Q92782 380 aa14.02□□□□□ -0.17
GNE-201ENST00000377902 ORM1P02763 201 aa14.01□□□□□ -0.17
GNE-201ENST00000377902 SMIM15Q7Z3B0 74 aa14.01□□□□□ -0.17
GNE-201ENST00000377902 RNF185Q96GF1 192 aa14.01□□□□□ -0.17
GNE-201ENST00000377902 IGLV11-55A0A075B6I3 123 aa14.01□□□□□ -0.17
GNE-201ENST00000377902 MFAP4P55083 255 aa14.01□□□□□ -0.17
GNE-201ENST00000377902 HSD52Q0P140 79 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms