RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 Q6YL49 198 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 GBGT1Q8N5D6 347 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 ZNF331Q9NQX6 463 aaPredicted RBP12.93□□□□□ -0.34
HLA-A-202ENST00000376806 ZNF785A8K8V0 405 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 CYSRT1A8MQ03 144 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 SMIM6P0DI80 62 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 COX19Q49B96 90 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 MRPL54Q6P161 138 aaKnown RBP12.93□□□□□ -0.34
HLA-A-202ENST00000376806 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 LCNL1Q6ZST4 164 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 DAZAP1Q96EP5 407 aaKnown RBP12.93□□□□□ -0.34
HLA-A-202ENST00000376806 C12orf57Q99622 126 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 FOXC2Q99958 501 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 GNB1LQ9BYB4 327 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 GPR61Q9BZJ8 451 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 OTOGQ6ZRI0 2925 aa12.93□□□□□ -0.34
HLA-A-202ENST00000376806 IGHV3OR16-13A0A075B7E8 117 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 IGHV3-49A0A0A0MS15 119 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 IGHV3-74A0A0B4J1X5 117 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 NDUFA4O00483 81 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 CHEK1O14757 476 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 ZC2HC1AQ96GY0 325 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 NEU1Q99519 415 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 NAT8BQ9UHF3 227 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 TEX15Q9BXT5 2789 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 CREBBPQ92793 2442 aa12.92□□□□□ -0.34
HLA-A-202ENST00000376806 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
HLA-A-202ENST00000376806 NPIPB6E9PJ23 425 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
HLA-A-202ENST00000376806 IGHG4P01861 327 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 MT-ND6P03923 174 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 TMEM136Q6ZRR5 245 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 OR4X2Q8NGF9 303 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 ASCL2Q99929 193 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 SLC50A1Q9BRV3 221 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 S100A2P29034 98 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 IGFL4Q6B9Z1 124 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 OR4B1Q8NGF8 309 aa12.91□□□□□ -0.34
HLA-A-202ENST00000376806 HIGD1CA8MV81 97 aa12.9□□□□□ -0.34
HLA-A-202ENST00000376806 UNQ9165/PRO28630Q6UXU0 137 aa12.9□□□□□ -0.34
HLA-A-202ENST00000376806 FBLL1A6NHQ2 334 aaKnown RBP12.89□□□□□ -0.35
HLA-A-202ENST00000376806 A8MWL6 223 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
HLA-A-202ENST00000376806 PRDM13Q9H4Q3 707 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 FLNAP21333 2647 aaKnown RBP12.89□□□□□ -0.35
HLA-A-202ENST00000376806 HOXA3O43365 443 aaPredicted RBP12.89□□□□□ -0.35
HLA-A-202ENST00000376806 HLA-DQA1P01909 254 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 PSMB8P28062 276 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 TCF24Q7RTU0 167 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 C8orf49Q96NF6 230 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 GFRA4Q9GZZ7 299 aa12.89□□□□□ -0.35
HLA-A-202ENST00000376806 ZNF705FA8MVS1 300 aaPredicted RBP12.88□□□□□ -0.35
HLA-A-202ENST00000376806 RAB4BP61018 213 aa12.88□□□□□ -0.35
HLA-A-202ENST00000376806 TMEM89A2RUT3 159 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 FABP4P15090 132 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 LCN12Q6JVE5 192 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 ATP5L2Q7Z4Y8 100 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 GTSF1Q8WW33 167 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 HIST1H2BLQ99880 126 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 ZNF702PQ9H963 129 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 ACANP16112 2415 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 CT45A10P0DMU9 189 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 C8orf86Q6ZUL3 223 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 RNF182Q8N6D2 247 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 OR2D3Q8NGH3 330 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 OR10D4PQ8NGN7 298 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 VGLL1Q99990 258 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 NPFFR1Q9GZQ6 430 aa12.87□□□□□ -0.35
HLA-A-202ENST00000376806 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
HLA-A-202ENST00000376806 GRIFINA4D1Z8 144 aa12.86□□□□□ -0.35
HLA-A-202ENST00000376806 FAM231BA6NCW3 169 aa12.86□□□□□ -0.35
HLA-A-202ENST00000376806 CRIP1P50238 77 aa12.86□□□□□ -0.35
HLA-A-202ENST00000376806 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
HLA-A-202ENST00000376806 COX8CQ7Z4L0 72 aa12.86□□□□□ -0.35
HLA-A-202ENST00000376806 A0A1B0GUS0 222 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 A0A1B0GXF2 115 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 SMAD7O15105 426 aaKnown RBP12.85□□□□□ -0.35
HLA-A-202ENST00000376806 SAPCD1Q5SSQ6 148 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 RBPMS2Q6ZRY4 209 aaKnown RBP12.85□□□□□ -0.35
HLA-A-202ENST00000376806 Q8TAT8 98 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 MRPL53Q96EL3 112 aaKnown RBP12.85□□□□□ -0.35
HLA-A-202ENST00000376806 PRR25Q96S07 402 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 PEF1Q9UBV8 284 aaKnown RBP12.85□□□□□ -0.35
HLA-A-202ENST00000376806 PRAC2D3DTV9 90 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 AMBPP02760 352 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 CRISP2P16562 243 aa12.85□□□□□ -0.35
HLA-A-202ENST00000376806 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
HLA-A-202ENST00000376806 GZMBP10144 247 aa12.84□□□□□ -0.35
HLA-A-202ENST00000376806 GDF5OSQ5U4N7 250 aa12.84□□□□□ -0.35
HLA-A-202ENST00000376806 IL17RELQ6ZVW7 336 aa12.84□□□□□ -0.35
HLA-A-202ENST00000376806 SIGLECL1Q8N7X8 197 aa12.84□□□□□ -0.35
HLA-A-202ENST00000376806 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
HLA-A-202ENST00000376806 PACRGQ96M98 296 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms