RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 PSG7Q13046 419 aa6.89□□□□□ -1.31
HSPG2-203ENST00000374695 TMEM158Q8WZ71 300 aa6.89□□□□□ -1.31
HSPG2-203ENST00000374695 SPSB2Q99619 263 aa6.89□□□□□ -1.31
HSPG2-203ENST00000374695 TFF2Q03403 129 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 RNF114Q9Y508 228 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 NOTCH2Q04721 2471 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 NPSP0C0P6 89 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 CD33P20138 364 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 SP7Q8TDD2 431 aaPredicted RBP6.88□□□□□ -1.31
HSPG2-203ENST00000374695 SH2D1AO60880 128 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 LCN12Q6JVE5 192 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 MPV17L2Q567V2 206 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 RMI2Q96E14 147 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 ZNF625Q96I27 306 aaPredicted RBP6.88□□□□□ -1.31
HSPG2-203ENST00000374695 TLN2Q9Y4G6 2542 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 IGLV3-32A0A0A0MS00 114 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 IGKV2-40A0A087WW87 121 aaPredicted RBP6.88□□□□□ -1.31
HSPG2-203ENST00000374695 IGKV2D-40P01614 121 aaPredicted RBP6.88□□□□□ -1.31
HSPG2-203ENST00000374695 RNF166Q96A37 237 aaPredicted RBP6.88□□□□□ -1.31
HSPG2-203ENST00000374695 THAP8Q8NA92 274 aa6.88□□□□□ -1.31
HSPG2-203ENST00000374695 SAP30O75446 220 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 AZU1P20160 251 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 TRBV25-1A0A075B6N4 114 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 M0R1W7 72 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 METRNQ9UJH8 293 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 TIAF1O95411 115 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 C14orf178Q8N769 122 aaPredicted RBP6.87□□□□□ -1.31
HSPG2-203ENST00000374695 PATE3B3GLJ2 98 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 TMEM14EPQ6UXP3 125 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 CPAMD8Q8IZJ3 1885 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 STPG4Q8N801 248 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 hADV29S1A0JD25 119 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 RBM3P98179 157 aaKnown RBP6.87□□□□□ -1.31
HSPG2-203ENST00000374695 NMSQ5H8A3 153 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 IGLC2P0DOY2 106 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 IGLC3P0DOY3 106 aa6.87□□□□□ -1.31
HSPG2-203ENST00000374695 IGKV1D-13A0A0B4J2D9 117 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 IGKV1-13P0DP09 117 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 C20orf204Q6ZNR8 217 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 LIME1Q9H400 295 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 WFDC1Q9HC57 220 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 LRP4O75096 1905 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 HLA-DMBP28068 263 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 DMRTC2Q8IXT2 367 aaPredicted RBP6.86□□□□□ -1.31
HSPG2-203ENST00000374695 POLR3KQ9Y2Y1 108 aaPredicted RBP6.86□□□□□ -1.31
HSPG2-203ENST00000374695 EREGO14944 169 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 C3orf79P0CE67 100 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 C5orf64Q2M2E5 130 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 WBP1Q96G27 269 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 CELA3BP08861 270 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 RPL15P61313 204 aaKnown RBP6.86□□□□□ -1.31
HSPG2-203ENST00000374695 Q86TA4 180 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 I3L3M4 83 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 J3QRE1 110 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 F8P00451 2351 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 COX8AP10176 69 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 SMIM20Q8N5G0 67 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 C4orf51C9J302 202 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 NDUFB8O95169 186 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 TCF15Q12870 199 aa6.86□□□□□ -1.31
HSPG2-203ENST00000374695 ZNF474Q6S9Z5 364 aaPredicted RBP6.86□□□□□ -1.31
HSPG2-203ENST00000374695 TRBV6-6A0A0A6YYG2 114 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 PPIFP30405 207 aaKnown RBP6.85□□□□□ -1.31
HSPG2-203ENST00000374695 ANKRD29Q8N6D5 301 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 RFPL3SP0C7P2 107 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 ZNF329Q86UD4 541 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 CYTL1Q9NRR1 136 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 SPATA25Q9BR10 227 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 SCRT1Q9BWW7 348 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 DAZ1Q9NQZ3 744 aaKnown RBP6.85□□□□□ -1.31
HSPG2-203ENST00000374695 TIMM23O14925 209 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 SLAQ13239 276 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 RAI1Q7Z5J4 1906 aaPredicted RBP6.85□□□□□ -1.31
HSPG2-203ENST00000374695 KLRD1Q13241 179 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 BVES-AS1Q5T3Y7 98 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 TRAV40A0A0B4J280 105 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 A0A1W2PPM0 123 aa6.85□□□□□ -1.31
HSPG2-203ENST00000374695 IGHV1-8P0DP01 117 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 SIGLEC8Q9NYZ4 499 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 GOLGB1Q14789 3259 aaKnown RBP6.84□□□□□ -1.31
HSPG2-203ENST00000374695 K7EMI3 77 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 CCL3L1P16619 93 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 CEND1Q8N111 149 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 IGHV3-73A0A0B4J1V6 119 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 NAA38Q9BRA0 125 aaKnown RBP6.84□□□□□ -1.31
HSPG2-203ENST00000374695 CRLF1O75462 422 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 HGFACQ04756 655 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 DEFB125Q8N687 156 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 ADAMTS20P59510 1910 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 YPEL3P61236 119 aaPredicted RBP6.84□□□□□ -1.31
HSPG2-203ENST00000374695 ACANP16112 2415 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 SHISA3A0PJX4 238 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 PRSS46E5RG02 174 aa6.84□□□□□ -1.31
HSPG2-203ENST00000374695 FOXG1P55316 489 aaPredicted RBP6.84□□□□□ -1.32
HSPG2-203ENST00000374695 VMO1Q7Z5L0 202 aa6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms