RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 TRAV20A0A0B4J274 112 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 A8MWP6 167 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 B4DSR2 109 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 SCGB1D1O95968 90 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 ATP5G2Q06055 141 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 SLAQ13239 276 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 SLC50A1Q9BRV3 221 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 NAGKQ9UJ70 344 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 A0A1B0GUS0 222 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 IGHV3-23P01764 117 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 CLEC3BP05452 202 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 LINC00310P59036 64 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 DEFA6Q01524 100 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 TOMM20LQ6UXN7 152 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 LINC00322Q6ZN03 302 aaPredicted RBP10.89□□□□□ -0.67
USF1-202ENST00000368020 LINC00469Q8N7U9 141 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 Q96MF0 132 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
USF1-202ENST00000368020 NUPR1O60356 82 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 IGF1P05019 195 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 GPX1P07203 203 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 C19orf54Q5BKX5 351 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 TCF24Q7RTU0 167 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 BORCS7Q96B45 105 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 METTL26Q96S19 204 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 CLEC5AQ9NY25 188 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 CSPG4Q6UVK1 2322 aa10.88□□□□□ -0.67
USF1-202ENST00000368020 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 ZNF324O75467 553 aaPredicted RBP10.87□□□□□ -0.67
USF1-202ENST00000368020 DDTP30046 118 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 CAMPP49913 170 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 RIGQ13278 110 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 KIAA1644Q3SXP7 199 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 CCDC140Q96MF4 163 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 NDFIP1Q9BT67 221 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 CR1P17927 2039 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 A0A1B0GUT8 65 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 RNF223E7ERA6 249 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 G3V318 75 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 CHEK1O14757 476 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 BUB3O43684 328 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
USF1-202ENST00000368020 CLEC19AQ6UXS0 136 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 PIFOQ8TCI5 191 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
USF1-202ENST00000368020 FLNAP21333 2647 aaKnown RBP10.86□□□□□ -0.67
USF1-202ENST00000368020 ZNF785A8K8V0 405 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 M0R3E3 92 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 RAB4AP20338 218 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 BMI1P35226 326 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 AMTP48728 403 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 WFDC11Q8NEX6 87 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 MRPL53Q96EL3 112 aaKnown RBP10.86□□□□□ -0.67
USF1-202ENST00000368020 ALKBH7Q9BT30 221 aaPredicted RBP10.86□□□□□ -0.67
USF1-202ENST00000368020 ZNF580Q9UK33 172 aa10.86□□□□□ -0.67
USF1-202ENST00000368020 A0A1W2PS18 150 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 SH2D7A6NKC9 451 aaPredicted RBP10.85□□□□□ -0.67
USF1-202ENST00000368020 IGHG2P01859 326 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 SRSF2Q01130 221 aaKnown RBP10.85□□□□□ -0.67
USF1-202ENST00000368020 BRD3OSQ6XYD6 125 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 Q6ZWC4 215 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 TMEM219Q86XT9 240 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 BCL6BQ8N143 479 aaPredicted RBP10.85□□□□□ -0.67
USF1-202ENST00000368020 LINC01356Q8N9X3 169 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 GATD1Q8NB37 220 aa10.85□□□□□ -0.67
USF1-202ENST00000368020 A6NDX4 124 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 J3QLI3 93 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 C9orf152Q5JTZ5 239 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 FAM209BQ5JX69 171 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 GDF5OSQ5U4N7 250 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 ZNF664Q8N3J9 261 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 HIF1ANQ9NWT6 349 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 TLN2Q9Y4G6 2542 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 F2Z2F3 143 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 HSBP1O75506 76 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 TRGV3P03979 118 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
USF1-202ENST00000368020 PRR25Q96S07 402 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 SMAD5-AS1Q9Y6J3 95 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 ZANQ9Y493 2812 aa10.84□□□□□ -0.67
USF1-202ENST00000368020 ACANP16112 2415 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 IGHV3OR16-10A0A075B7F0 116 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.83□□□□□ -0.68
USF1-202ENST00000368020 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 LINC01548A6NM66 108 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 ZNF705FA8MVS1 300 aaPredicted RBP10.83□□□□□ -0.68
USF1-202ENST00000368020 APOHP02749 345 aaPredicted RBP10.83□□□□□ -0.68
USF1-202ENST00000368020 ZNF705DP0CH99 300 aaPredicted RBP10.83□□□□□ -0.68
USF1-202ENST00000368020 ZNF705BP0CI00 300 aaPredicted RBP10.83□□□□□ -0.68
USF1-202ENST00000368020 IGHV4-38-2P0DP08 117 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 FOSL1P15407 271 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 RCHY1Q96PM5 261 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 NRN1Q9NPD7 142 aa10.83□□□□□ -0.68
USF1-202ENST00000368020 LOC102724200A0A096LPH7 203 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms