RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 COL4A5P29400 1685 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 NUMA1Q14980 2115 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TANC2Q9HCD6 1990 aa1.85□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TNS3Q68CZ2 1445 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 USP54Q70EL1 1684 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 PXDNLA1KZ92 1463 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 COL1A1P02452 1464 aaPredicted RBP1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 A0A087WSZ3 146 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 TRAV27A0A087WT01 109 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 LOC107986453A0A1B0GWG9 222 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ZNF727A8MUV8 499 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 E7EUB6 86 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SLC25A5P05141 298 aaKnown RBP1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 IGKV4-1P06312 121 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 GPX1P07203 203 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 HIST1H1BP16401 226 aaKnown RBP1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 Q1T7F1 81 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 C1orf134Q5TEV5 83 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 C2orf82Q6UX34 121 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 OR4C6Q8NH72 309 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 SFT2D1Q8WV19 159 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ERG28Q9UKR5 140 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 ADGRB3O60242 1522 aa1.84□□□□□ -2.11
RNU6-1249P-201ENST00000363237 LAMB2P55268 1798 aa1.84□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CCDC160A6NGH7 325 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 C2orf70A6NJV1 201 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 B4DSR2 109 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 IGLC6P0CF74 106 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CCL4P13236 92 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 HLA-DRB4P13762 266 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 BRS3P32247 399 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 AKR1D1P51857 326 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 RPS25P62851 125 aaKnown RBP1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 PDE6HQ13956 83 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CIRBPQ14011 172 aaKnown RBP1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 DEFB113Q30KQ7 82 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ARPINQ7Z6K5 226 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 RPS19BP1Q86WX3 136 aaKnown RBP1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CTAGE3PQ8IX95 158 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 OR10AC1Q8NH08 325 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CLEC2BQ92478 149 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 RAB37Q96AX2 223 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TP53RKQ96S44 253 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 LPAR5Q9H1C0 372 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SOX21Q9Y651 276 aaPredicted RBP1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 HLA-DRB4X5D2U9 266 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 PLXNA4Q9HCM2 1894 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MICAL3Q7RTP6 2002 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 COL24A1Q17RW2 1714 aa1.83□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SPEF2Q9C093 1822 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TRAV14DV4A0A0A6YYC5 116 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TCRBV4S1A1TA0A5B7 111 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 K7ERU9 68 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ERC2-IT1O76042 136 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TRACP01848 142 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 KDELR1P24390 212 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 COPZ1P61923 177 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SELENOWP63302 87 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 DIAPH2-AS1Q14236 149 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 BRD3OSQ6XYD6 125 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TMEM91Q6ZNR0 172 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 OR5AK2Q8NH90 309 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 C4orf3Q8WVX3 66 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ARL11Q969Q4 196 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CGREF1Q99674 301 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TNFSF18Q9UNG2 199 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 NALCNQ8IZF0 1738 aa1.82□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MYH7P12883 1935 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SDK2Q58EX2 2172 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 PHLPP1O60346 1717 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 POLEQ07864 2286 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TRAV10A0A0B4J240 114 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 PNMA8CA0A1B0GUJ8 204 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 LINC00694P0DN24 101 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ETV6P41212 452 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 RRAS2P62070 204 aaPredicted RBP1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ASB16-AS1Q495Z4 193 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 GLIPR1L1Q6UWM5 242 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 TEN1Q86WV5 123 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 METTL1Q9UBP6 276 aaKnown RBP1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SYNJ1O43426 1573 aa1.81□□□□□ -2.12
RNU6-1249P-201ENST00000363237 RIMS1Q86UR5 1692 aaKnown RBP1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 FOCADQ5VW36 1801 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MGAMO43451 1857 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 MYH6P13533 1939 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 J3QRE1 110 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 NPFFO15130 113 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 DLEU1O43261 78 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SLC25A4P12235 298 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 KRTAP10-8P60410 259 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 SNRPD3P62318 126 aaKnown RBP1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 BLCAPP62952 87 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 FP248Q71RG6 208 aaPredicted RBP1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 OR5AS1Q8N127 324 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 ZNF431Q8TF32 576 aaPredicted RBP1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 PSMF1Q92530 271 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 LINC00470Q9BZP3 86 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 FKBP11Q9NYL4 201 aa1.8□□□□□ -2.12
RNU6-1249P-201ENST00000363237 CHCHD2Q9Y6H1 151 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms