RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 RPL35AP18077 110 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 HOXD3P31249 432 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 DEFB131AP59861 70 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 DEFB1P60022 68 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 FA2HQ7L5A8 372 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 EIF4E3Q8N5X7 224 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 TXN2Q99757 166 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 CARHSP1Q9Y2V2 147 aaKnown RBP4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 SEC14L6B5MCN3 397 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 LINC01619G3V211 115 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 KRTDAPP60985 99 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 UBE2E2Q96LR5 201 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 SSBP4Q9BWG4 385 aaPredicted RBP4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 C11orf1Q9H5F2 150 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 ZNF586Q9NXT0 402 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 HIGD1CA8MV81 97 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 APCSP02743 223 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 ELANEP08246 267 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 TAS2R60P59551 318 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 STHQ8IWL8 128 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 THAP8Q8NA92 274 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 ZNF502Q8TBZ5 544 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 DEFB104AQ8WTQ1 72 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 FMC1Q96HJ9 113 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 LINC01587Q99440 93 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 MEGF9Q9H1U4 602 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 ARL2-SNX15V9GYD0 113 aa4.28□□□□□ -1.72
PCDH11X-202ENST00000361655 MEOX2P50222 304 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 UNQ9165/PRO28630Q6UXU0 137 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 LINC01551Q86U37 167 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 NRN1Q9NPD7 142 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 MAST4O15021 2626 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 TRBV19A0A075B6N1 114 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 TRAV12-3A0A0B4J271 114 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 CBY3A6NI87 242 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 VWC2LB2RUY7 222 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 CD7P09564 240 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 ADMP35318 185 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 AMTP48728 403 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 WDR73Q6P4I2 378 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 OR10D4PQ8NGN7 298 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 TEX15Q9BXT5 2789 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 A0A087WW49 117 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 FABP5P3A8MUU1 101 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 NDUFA4O00483 81 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 APOHP02749 345 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 CRYGCP07315 174 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 FOLR2P14207 255 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 TSPOP30536 169 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 VWC2Q2TAL6 325 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 FAM209BQ5JX69 171 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 Q6YL49 198 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 ZNF114Q8NC26 417 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 NUDT10Q8NFP7 164 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 FXYD5Q96DB9 178 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 NUDT11Q96G61 164 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 CITED2Q99967 270 aaPredicted RBP4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 MRPL18Q9H0U6 180 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 MGAM2Q2M2H8 2515 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 CRYGBP07316 175 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 CKS2P33552 79 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 FAM162BQ5T6X4 162 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 C12orf54Q6X4T0 127 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 RPP21Q9H633 154 aaKnown RBP4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 BAHCC1Q9P281 2608 aa4.27□□□□□ -1.73
PCDH11X-202ENST00000361655 TRAV12-2A0A075B6T6 113 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 H3BRN7 92 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 CCL24O00175 119 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 OVOL1O14753 267 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 CD5LO43866 347 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 SRIP30626 198 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 RIPPLY3P57055 190 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 NUTF2P61970 127 aaKnown RBP4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 PSG3Q16557 428 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 TMEM183BQ1AE95 376 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 RRN3P1Q2M238 152 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 TMEM183AQ8IXX5 376 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 C1orf159Q96HA4 380 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 FOXC2Q99958 501 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 TET2Q6N021 2002 aaPredicted RBP4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 IGKV1D-37A0A075B6S9 117 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 SPINK13Q1W4C9 94 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 C8orf49Q96NF6 230 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 VGLL1Q99990 258 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 IL36BQ9NZH7 164 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 KNCNA6PVL3 124 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 H3BVH4 76 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 CD28P10747 220 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 HTN3P15516 51 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 ZNF138P52744 262 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 TCTAP57738 103 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 EBI3Q14213 229 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 C9orf139Q6ZV77 190 aa4.26□□□□□ -1.73
PCDH11X-202ENST00000361655 ZFHX4Q86UP3 3567 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms