RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 TMEM14CQ9P0S9 112 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 BUB1B-PAK6H3BSN5 160 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 NPYP01303 97 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 IGKV1-16P04430 117 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 CMC4P56277 68 aaPredicted RBP10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 RNASE8Q8TDE3 154 aaKnown RBP10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 CARD19Q96LW7 228 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 ARHGEF17Q96PE2 2063 aaPredicted RBP10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 A0A1W2PPI3 338 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 ZNF747Q9BV97 191 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 TMEM126AQ9H061 195 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 A0A087WWL8 130 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 NDUFB8O95169 186 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 IGFL4Q6B9Z1 124 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 NDUFA4L2Q9NRX3 87 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 EPOPA6NHQ4 379 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 NDUFS7O75251 213 aa10.26□□□□□ -0.77
SYNCRIP-201ENST00000355238 THBDP07204 575 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 LMO1P25800 156 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 CSRP2Q16527 193 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 E9PLN8 166 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 TEX48A0A1B0GUV7 120 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 Q6ZVH6 145 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 TRAV13-1A0A0B4J241 112 aa10.25□□□□□ -0.77
SYNCRIP-201ENST00000355238 A0A087WX48 190 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 FAM223BA6NKX1 122 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 UNQ6494/PRO21346Q6UXR6 183 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 FAM223AQ8IWN6 122 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 USMG5Q96IX5 58 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 THSD7AQ9UPZ6 1657 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 AHCTF1Q8WYP5 2266 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 DOCK11Q5JSL3 2073 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 K7EN84 100 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 ACYP1P07311 99 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 HTN3P15516 51 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 NDPQ00604 133 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 CFHR1Q03591 330 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 SIPA1L1O43166 1804 aa10.24□□□□□ -0.77
SYNCRIP-201ENST00000355238 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 M0R1W7 72 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 ZFP36L1Q07352 338 aaKnown RBP10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 VMO1Q7Z5L0 202 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 I3L3M4 83 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 NTN3O00634 580 aaPredicted RBP10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 SMIM2Q9BVW6 85 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 TMEM258P61165 79 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 PRR25Q96S07 402 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 LYNX1G3V0Z9 82 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 LYNX1P0DP58 116 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 IL17RELQ6ZVW7 336 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 DKK2Q9UBU2 259 aa10.23□□□□□ -0.77
SYNCRIP-201ENST00000355238 NDUFA12Q9UI09 145 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 RTTNQ86VV8 2226 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 MRAPQ8TCY5 172 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 TRGV1A0A0A0MS02 117 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 C17orf82Q86X59 251 aaPredicted RBP10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 J3QQQ9 107 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 F8WEM9 126 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 RHODO00212 210 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 SMIM20Q8N5G0 67 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 C20orf78Q9BR46 151 aa10.22□□□□□ -0.77
SYNCRIP-201ENST00000355238 ZNF318Q5VUA4 2279 aa10.21□□□□□ -0.77
SYNCRIP-201ENST00000355238 SAP30O75446 220 aa10.21□□□□□ -0.77
SYNCRIP-201ENST00000355238 B3GALT5-AS1P59052 145 aa10.21□□□□□ -0.77
SYNCRIP-201ENST00000355238 ZNF672Q499Z4 452 aaPredicted RBP10.21□□□□□ -0.77
SYNCRIP-201ENST00000355238 INS-IGF2F8WCM5 200 aa10.21□□□□□ -0.77
SYNCRIP-201ENST00000355238 INSP01308 110 aa10.21□□□□□ -0.77
SYNCRIP-201ENST00000355238 FOXI2Q6ZQN5 318 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 IGLL5B9A064 214 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 LTAP01374 205 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 IGLC1P0CG04 106 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 CFC1BP0CG36 223 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 CFC1P0CG37 223 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 RBMY1FQ15415 496 aaKnown RBP10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 SS18Q15532 418 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 FXYD5Q96DB9 178 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 POU2AF1Q16633 256 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 SCRT2Q9NQ03 307 aa10.21□□□□□ -0.78
SYNCRIP-201ENST00000355238 WIPF3A6NGB9 483 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 K7EMI3 77 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 LINC00527Q9UJ94 153 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 TRAV13-2A0A0B4J235 113 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 SDHAF1A6NFY7 115 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 ZC2HC1AQ96GY0 325 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 SHISA9B4DS77 424 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 H3BRN7 92 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 CRYBA4P53673 196 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 PRR20EP86478 221 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 PRR20CP86479 221 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 PRR20DP86480 221 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 PRR20BP86481 221 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 PRR20AP86496 221 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 K7EM74 188 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 ETV2O00321 342 aaPredicted RBP10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
SYNCRIP-201ENST00000355238 CASP8AP2Q9UKL3 1982 aa10.19□□□□□ -0.78
SYNCRIP-201ENST00000355238 PTPRDP23468 1912 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms