RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 UTF1Q5T230 341 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 DTX2Q86UW9 622 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 IGLC1P0CG04 106 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 DEFB130BP0DP73 79 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 DEFB130AP0DP74 79 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 MST1LQ2TV78 715 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 TMEM70Q9BUB7 260 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 SOX21Q9Y651 276 aaPredicted RBP10.86□□□□□ -0.67
SMC6-201ENST00000351948 TRGV11A0A075B6L2 103 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 YPEL3P61236 119 aaPredicted RBP10.86□□□□□ -0.67
SMC6-201ENST00000351948 PKIAP61925 76 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 Q8N7P7 452 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 ST20Q9HBF5 79 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 A0A0C4DFX4 3053 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
SMC6-201ENST00000351948 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 PRDM13Q9H4Q3 707 aa10.86□□□□□ -0.67
SMC6-201ENST00000351948 A0A087WWL8 130 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 KNCNA6PVL3 124 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 SPOCK3Q9BQ16 436 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 PARD6GQ9BYG4 376 aaPredicted RBP10.85□□□□□ -0.67
SMC6-201ENST00000351948 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 ZNF415Q09FC8 603 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 C14orf144Q96I85 54 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 SLC25A2Q9BXI2 301 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 FNDC10F2Z333 226 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 TCF21O43680 179 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 NDUFA3O95167 84 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 ZNF843Q8N446 348 aa10.85□□□□□ -0.67
SMC6-201ENST00000351948 PLXNB1O43157 2135 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 FAM90A2PQ658T7 463 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 RAB37Q96AX2 223 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 KLK9Q9UKQ9 250 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 PPP1R17O96001 155 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 ADCYAP1P18509 176 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 Q86TA4 180 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 BCL6BQ8N143 479 aaPredicted RBP10.84□□□□□ -0.67
SMC6-201ENST00000351948 LINC00477Q96M19 166 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BKO60814 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BJP06899 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BOP23527 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BBP33778 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BDP58876 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BCP62807 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST2H2BEQ16778 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.84□□□□□ -0.67
SMC6-201ENST00000351948 C8orf86Q6ZUL3 223 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BHQ93079 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H4GQ99525 98 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BNQ99877 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 HIST1H2BMQ99879 126 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 IGHV7-81A0A0B4J1V7 117 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 A0A1B0GW15 77 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 GGTLC3B5MD39 225 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 RPL13AP40429 203 aaKnown RBP10.84□□□□□ -0.67
SMC6-201ENST00000351948 CDSNQ15517 529 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 C5orf30Q96GV9 206 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 C17orf77Q96MU5 243 aa10.84□□□□□ -0.67
SMC6-201ENST00000351948 D6R8Y8 96 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 SMKR1H3BMG3 65 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 SORL1Q92673 2214 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 HLA-DMBP28068 263 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 CFHR3Q02985 330 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 DNLZQ5SXM8 178 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 C2CD3Q4AC94 2353 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 TRBV19A0A075B6N1 114 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 POU2AF1Q16633 256 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 NACAE9PAV3 2078 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 PAPPA-AS1Q5QFB9 102 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 CHCHD5Q9BSY4 110 aa10.83□□□□□ -0.68
SMC6-201ENST00000351948 ARHGAP32A7KAX9 2087 aa10.82□□□□□ -0.68
SMC6-201ENST00000351948 CHD3Q12873 2000 aaKnown RBP10.82□□□□□ -0.68
SMC6-201ENST00000351948 SLC25A34Q6PIV7 304 aa10.82□□□□□ -0.68
SMC6-201ENST00000351948 TMEM170AQ8WVE7 144 aa10.82□□□□□ -0.68
SMC6-201ENST00000351948 F2Z2F3 143 aa10.82□□□□□ -0.68
SMC6-201ENST00000351948 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
SMC6-201ENST00000351948 F6UB75 175 aa10.82□□□□□ -0.68
SMC6-201ENST00000351948 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.82□□□□□ -0.68
SMC6-201ENST00000351948 LYPD1Q8N2G4 141 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 TRAV9-1A0A075B6T8 112 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 INSP01308 110 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 LINC00614P0C842 121 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 FOXL1Q12952 345 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 ZNF491Q8N8L2 437 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 VPS25Q9BRG1 176 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 FOSL1P15407 271 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 IL15RAQ13261 267 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 TTC9CQ8N5M4 171 aa10.81□□□□□ -0.68
SMC6-201ENST00000351948 A6NDN8 102 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 NDUFA4O00483 81 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 ZNF876PQ49A33 203 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 POLQO75417 2590 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 E7EUB6 86 aa10.8□□□□□ -0.68
SMC6-201ENST00000351948 AMN1Q8IY45 258 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms