RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 TAGLN2P37802 199 aaKnown RBP10.27□□□□□ -0.77
SEC13-202ENST00000350697 PDE6HQ13956 83 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 TRPT1Q86TN4 253 aaKnown RBP10.27□□□□□ -0.77
SEC13-202ENST00000350697 RPP25LQ8N5L8 163 aaKnown RBP10.27□□□□□ -0.77
SEC13-202ENST00000350697 SFT2D1Q8WV19 159 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 SAV1Q9H4B6 383 aaPredicted RBP10.27□□□□□ -0.77
SEC13-202ENST00000350697 CLEC5AQ9NY25 188 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 NBEAL2Q6ZNJ1 2754 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 COL7A1Q02388 2944 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 DNAH9Q9NYC9 4486 aa10.27□□□□□ -0.77
SEC13-202ENST00000350697 H3BMM0 161 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 UBE2CO00762 179 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 NBEAP1P0C6P0 100 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 CDC34P49427 236 aaPredicted RBP10.26□□□□□ -0.77
SEC13-202ENST00000350697 FHITP49789 147 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 PSG3Q16557 428 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 EBLN2Q6P2I7 272 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 FXYD5Q96DB9 178 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 SPATA25Q9BR10 227 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 CSTL1Q9H114 145 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 TREM1Q9NP99 234 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
SEC13-202ENST00000350697 OR10J4P0C629 311 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 HLA-DMBP28068 263 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 PPT1P50897 306 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 DEFB1P60022 68 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 GDF5OSQ5U4N7 250 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 PQLC2Q6ZP29 291 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 ZNF738Q8NE65 137 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 BLNKQ8WV28 456 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 ZNF503Q96F45 646 aa10.25□□□□□ -0.77
SEC13-202ENST00000350697 A0A0J9YX75 114 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 MAP1LC3B2A6NCE7 125 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 F6UB75 175 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 EIF3GO75821 320 aaKnown RBP eCLIP10.24□□□□□ -0.77
SEC13-202ENST00000350697 NDUFB4O95168 129 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 UBE2L3P68036 154 aaKnown RBP10.24□□□□□ -0.77
SEC13-202ENST00000350697 PSG9Q00887 426 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 PMS2P11Q13670 270 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 MORN3Q6PF18 240 aaPredicted RBP10.24□□□□□ -0.77
SEC13-202ENST00000350697 RAB24Q969Q5 203 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 MAP1LC3BQ9GZQ8 125 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 EIF5A2Q9GZV4 153 aaKnown RBP10.24□□□□□ -0.77
SEC13-202ENST00000350697 TMEM218A2RU14 115 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 STAG3L2P0CL84 134 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 STAG3L3P0CL85 134 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 NUTF2P61970 127 aaKnown RBP10.24□□□□□ -0.77
SEC13-202ENST00000350697 Q6ZWC4 215 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 CCDC28AQ8IWP9 274 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 RPUSD4Q96CM3 377 aaKnown RBP10.24□□□□□ -0.77
SEC13-202ENST00000350697 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 AAMDCQ9H7C9 122 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 TENM3Q9P273 2699 aa10.24□□□□□ -0.77
SEC13-202ENST00000350697 HMGB3O15347 200 aaKnown RBP10.23□□□□□ -0.77
SEC13-202ENST00000350697 DUSP14O95147 198 aaKnown RBP10.23□□□□□ -0.77
SEC13-202ENST00000350697 CA1P00915 261 aaPredicted RBP10.23□□□□□ -0.77
SEC13-202ENST00000350697 OR4B1Q8NGF8 309 aa10.23□□□□□ -0.77
SEC13-202ENST00000350697 MRPL53Q96EL3 112 aaKnown RBP10.23□□□□□ -0.77
SEC13-202ENST00000350697 SEC11CQ9BY50 192 aa10.23□□□□□ -0.77
SEC13-202ENST00000350697 PRELID1Q9Y255 219 aa10.23□□□□□ -0.77
SEC13-202ENST00000350697 U3KQK5 164 aa10.23□□□□□ -0.77
SEC13-202ENST00000350697 STAB2Q8WWQ8 2551 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 RBFOX3A6NFN3 312 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 NDUFS6O75380 124 aaKnown RBP10.22□□□□□ -0.77
SEC13-202ENST00000350697 IGKV3-20P01619 116 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 LYPD1Q8N2G4 141 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 OR8A1Q8NGG7 326 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 RCHY1Q96PM5 261 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 MANBALQ9NQG1 85 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 TP53TG1Q9Y2A0 90 aa10.22□□□□□ -0.77
SEC13-202ENST00000350697 A8MTW9 85 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 ZNF705FA8MVS1 300 aaPredicted RBP10.21□□□□□ -0.78
SEC13-202ENST00000350697 F8W036 122 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 CXorf1O96002 111 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 ZNF705DP0CH99 300 aaPredicted RBP10.21□□□□□ -0.78
SEC13-202ENST00000350697 ZNF705BP0CI00 300 aaPredicted RBP10.21□□□□□ -0.78
SEC13-202ENST00000350697 CNN1P51911 297 aaKnown RBP10.21□□□□□ -0.78
SEC13-202ENST00000350697 RANP62826 216 aaKnown RBP10.21□□□□□ -0.78
SEC13-202ENST00000350697 HIST1H1AQ02539 215 aaPredicted RBP10.21□□□□□ -0.78
SEC13-202ENST00000350697 ICAM4Q14773 271 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 ZNF726P1Q15940 193 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 SSX7Q7RTT5 188 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 EXOC3-AS1Q8N2X6 119 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 SVBPQ8N300 66 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 RETNQ9HD89 108 aa10.21□□□□□ -0.78
SEC13-202ENST00000350697 M0R3E3 92 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 SPRY2O43597 315 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
SEC13-202ENST00000350697 GCHFRP30047 84 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 ZNF506Q5JVG8 444 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 RNF183Q96D59 192 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 OVOL2Q9BRP0 275 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 C1QTNF4Q9BXJ3 329 aa10.2□□□□□ -0.78
SEC13-202ENST00000350697 SLC35B3Q9H1N7 401 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms