RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 TCEAL7Q9BRU2 100 aa20.23■□□□□ 0.83
SSBP4-202ENST00000348495 PRELID1Q9Y255 219 aa20.23■□□□□ 0.83
SSBP4-202ENST00000348495 SLC25A5P05141 298 aaKnown RBP20.22■□□□□ 0.83
SSBP4-202ENST00000348495 GUCA2BQ16661 112 aa20.22■□□□□ 0.83
SSBP4-202ENST00000348495 ARL6IP6Q8N6S5 226 aa20.22■□□□□ 0.83
SSBP4-202ENST00000348495 EPDR1Q9UM22 224 aa20.22■□□□□ 0.83
SSBP4-202ENST00000348495 ZNF705FA8MVS1 300 aaPredicted RBP20.21■□□□□ 0.83
SSBP4-202ENST00000348495 PDE6DO43924 150 aa20.21■□□□□ 0.83
SSBP4-202ENST00000348495 SNRPD3P62318 126 aaKnown RBP20.21■□□□□ 0.83
SSBP4-202ENST00000348495 GNG5P63218 68 aa20.21■□□□□ 0.83
SSBP4-202ENST00000348495 BEAN1Q3B7T3 259 aa20.21■□□□□ 0.83
SSBP4-202ENST00000348495 UQCC3Q6UW78 93 aa20.21■□□□□ 0.83
SSBP4-202ENST00000348495 PKD1L1Q8TDX9 2849 aa20.21■□□□□ 0.83
SSBP4-202ENST00000348495 SRP19P09132 144 aaKnown RBP20.2■□□□□ 0.82
SSBP4-202ENST00000348495 ZNF688P0C7X2 276 aa20.2■□□□□ 0.82
SSBP4-202ENST00000348495 NDUFA5Q16718 116 aa20.2■□□□□ 0.82
SSBP4-202ENST00000348495 CMTM2Q8TAZ6 248 aa20.2■□□□□ 0.82
SSBP4-202ENST00000348495 C11orf52Q96A22 123 aa20.2■□□□□ 0.82
SSBP4-202ENST00000348495 F6UZH7 168 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 LINC00052Q96N35 136 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 GPR61Q9BZJ8 451 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 SCO2A0A1W2PP80 73 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 TCRAP04437 139 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 SLC7A5P1Q8MH63 180 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 HIST1H2BAQ96A08 127 aa20.19■□□□□ 0.82
SSBP4-202ENST00000348495 DIRC3C9JPN6 131 aa20.18■□□□□ 0.82
SSBP4-202ENST00000348495 TMEM250H0YL14 139 aa20.18■□□□□ 0.82
SSBP4-202ENST00000348495 PSMG4Q5JS54 123 aa20.18■□□□□ 0.82
SSBP4-202ENST00000348495 SORL1Q92673 2214 aa20.18■□□□□ 0.82
SSBP4-202ENST00000348495 PRAC2D3DTV9 90 aa20.17■□□□□ 0.82
SSBP4-202ENST00000348495 PEX7O00628 323 aa20.17■□□□□ 0.82
SSBP4-202ENST00000348495 CSN1S1P47710 185 aa20.17■□□□□ 0.82
SSBP4-202ENST00000348495 RPUSD4Q96CM3 377 aaKnown RBP20.17■□□□□ 0.82
SSBP4-202ENST00000348495 ATG101Q9BSB4 218 aa20.17■□□□□ 0.82
SSBP4-202ENST00000348495 PRB4P10163 310 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-202ENST00000348495 ZNF738Q8NE65 137 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 C2CD4CQ8TF44 421 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 MAP6D1Q9H9H5 199 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 TREM1Q9NP99 234 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 ODF3L2Q3SX64 289 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 OXLD1Q5BKU9 147 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 CYB561D1Q8N8Q1 229 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 RPH3ALQ9UNE2 315 aa20.16■□□□□ 0.82
SSBP4-202ENST00000348495 SLC35B3Q9H1N7 401 aa20.15■□□□□ 0.82
SSBP4-202ENST00000348495 GOLT1AQ6ZVE7 132 aa20.14■□□□□ 0.81
SSBP4-202ENST00000348495 DEFB131AP59861 70 aa20.13■□□□□ 0.81
SSBP4-202ENST00000348495 DEFB1P60022 68 aa20.13■□□□□ 0.81
SSBP4-202ENST00000348495 IGKV2-40A0A087WW87 121 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-202ENST00000348495 SERTM2A0A1B0GWG4 89 aa20.13■□□□□ 0.81
SSBP4-202ENST00000348495 IGKV2D-40P01614 121 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-202ENST00000348495 LINC00479Q96M42 142 aa20.13■□□□□ 0.81
SSBP4-202ENST00000348495 FAM110AQ9BQ89 295 aa20.13■□□□□ 0.81
SSBP4-202ENST00000348495 KLF12Q9Y4X4 402 aa20.13■□□□□ 0.81
SSBP4-202ENST00000348495 DERL1Q9BUN8 251 aa20.12■□□□□ 0.81
SSBP4-202ENST00000348495 RBAKDNA6NC62 111 aa20.11■□□□□ 0.81
SSBP4-202ENST00000348495 F6UB75 175 aa20.11■□□□□ 0.81
SSBP4-202ENST00000348495 IGLV2-11P01706 119 aa20.11■□□□□ 0.81
SSBP4-202ENST00000348495 CD7P09564 240 aa20.11■□□□□ 0.81
SSBP4-202ENST00000348495 C19orf73Q9NVV2 129 aa20.11■□□□□ 0.81
SSBP4-202ENST00000348495 CMC4P56277 68 aaPredicted RBP20.1■□□□□ 0.81
SSBP4-202ENST00000348495 EGFEM1PQ0D2K5 195 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 OR8A1Q8NGG7 326 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 CITED4Q96RK1 184 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 SFTA3P0C7M3 94 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 AKR1C3P42330 323 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 GDF5OSQ5U4N7 250 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 VGLL1Q99990 258 aa20.1■□□□□ 0.81
SSBP4-202ENST00000348495 TRAV8-1A0A0A6YYK1 113 aa20.09■□□□□ 0.81
SSBP4-202ENST00000348495 OR11H12B2RN74 326 aa20.09■□□□□ 0.81
SSBP4-202ENST00000348495 FOXI2Q6ZQN5 318 aa20.09■□□□□ 0.81
SSBP4-202ENST00000348495 TMEM75Q8N9X5 138 aa20.09■□□□□ 0.81
SSBP4-202ENST00000348495 PARLQ9H300 379 aa20.09■□□□□ 0.81
SSBP4-202ENST00000348495 SAV1Q9H4B6 383 aaPredicted RBP20.09■□□□□ 0.81
SSBP4-202ENST00000348495 CMYA5Q8N3K9 4069 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 TRAV34A0A0B4J273 112 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 A0A0J9YX75 114 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 TMEM218A2RU14 115 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 K7EQM0 130 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 RPL35P42766 123 aaKnown RBP20.08■□□□□ 0.81
SSBP4-202ENST00000348495 CEBPGP53567 150 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 TMEM183BQ1AE95 376 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 C9orf47Q6ZRZ4 202 aa20.08■□□□□ 0.81
SSBP4-202ENST00000348495 NPIPB6E9PJ23 425 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 ZNF705DP0CH99 300 aaPredicted RBP20.07■□□□□ 0.8
SSBP4-202ENST00000348495 ZNF705BP0CI00 300 aaPredicted RBP20.07■□□□□ 0.8
SSBP4-202ENST00000348495 CNN1P51911 297 aaKnown RBP20.07■□□□□ 0.8
SSBP4-202ENST00000348495 ZNF124Q15973 351 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 SAMD5Q5TGI4 173 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 APRG1Q8IVJ8 170 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 AGPAT4-IT1Q9H0P7 198 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 FMC1Q96HJ9 113 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 SGK494Q96LW2 274 aa20.07■□□□□ 0.8
SSBP4-202ENST00000348495 ERCC8Q13216 396 aa20.06■□□□□ 0.8
SSBP4-202ENST00000348495 OR10J6PQ8NGY7 276 aa20.06■□□□□ 0.8
SSBP4-202ENST00000348495 DNHD1Q96M86 4753 aa20.05■□□□□ 0.8
SSBP4-202ENST00000348495 TRBV6-1A0A0K0K1D8 114 aa20.05■□□□□ 0.8
SSBP4-202ENST00000348495 G3V4G9 280 aa20.05■□□□□ 0.8
SSBP4-202ENST00000348495 S100A9P06702 114 aaKnown RBP20.05■□□□□ 0.8
SSBP4-202ENST00000348495 KRTAP10-11P60412 298 aa20.05■□□□□ 0.8
SSBP4-202ENST00000348495 HIST1H1AQ02539 215 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms