RNA–Protein interactions for RNA: ENST00000334464.6

PDZD8-201, Transcript of PDZ domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD8, Length 9,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD8-201ENST00000334464 WFDC1Q9HC57 220 aa13.57□□□□□ -0.24
PDZD8-201ENST00000334464 H0YIZ8 118 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 DLEU1O43261 78 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 PPIFP30405 207 aaKnown RBP13.56□□□□□ -0.24
PDZD8-201ENST00000334464 ZNF561-AS1K7EIQ3 104 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 NKAPP1Q8N9T2 125 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 ZNF319Q9P2F9 582 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 SPANXCQ9NY87 97 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 C3orf56Q8N813 242 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 SELLP14151 372 aa13.56□□□□□ -0.24
PDZD8-201ENST00000334464 C14orf178Q8N769 122 aaPredicted RBP13.55□□□□□ -0.24
PDZD8-201ENST00000334464 TRBV25-1A0A075B6N4 114 aa13.55□□□□□ -0.24
PDZD8-201ENST00000334464 LCNL1Q6ZST4 164 aa13.55□□□□□ -0.24
PDZD8-201ENST00000334464 Q86TA4 180 aa13.55□□□□□ -0.24
PDZD8-201ENST00000334464 NCR2O95944 276 aa13.55□□□□□ -0.24
PDZD8-201ENST00000334464 CD59P13987 128 aa13.55□□□□□ -0.24
PDZD8-201ENST00000334464 RPL35AP18077 110 aaKnown RBP13.55□□□□□ -0.24
PDZD8-201ENST00000334464 VWCEQ96DN2 955 aa13.55□□□□□ -0.24
PDZD8-201ENST00000334464 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
PDZD8-201ENST00000334464 MDS2Q8NDY4 140 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 GATA4P43694 442 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 RPP25LQ8N5L8 163 aaKnown RBP13.54□□□□□ -0.24
PDZD8-201ENST00000334464 PRTN3P24158 256 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 A0A0G2JNJ9 132 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 GAFA1Q96PS6 74 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 Q9UFV3 132 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 RHPN1-AS1Q9BWJ2 59 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 ZNF492Q9P255 531 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 LY6DQ14210 128 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 PCDH15Q96QU1 1955 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 I3L3M4 83 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 TMEM158Q8WZ71 300 aa13.54□□□□□ -0.24
PDZD8-201ENST00000334464 ZNF474Q6S9Z5 364 aaPredicted RBP13.53□□□□□ -0.24
PDZD8-201ENST00000334464 CD177Q8N6Q3 437 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 A0A0U1RRA0 63 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
PDZD8-201ENST00000334464 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 IGHV3-73A0A0B4J1V6 119 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 LYL1P12980 280 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 SAA4P35542 130 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 E9PQ18 207 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 J3QLI3 93 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 KIR3DS1Q14943 382 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 IGKV1-27A0A075B6S5 117 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 TMEM14BQ9NUH8 114 aa13.53□□□□□ -0.24
PDZD8-201ENST00000334464 PFN1P07737 140 aaKnown RBP13.53□□□□□ -0.24
PDZD8-201ENST00000334464 LYNX1G3V0Z9 82 aa13.52□□□□□ -0.24
PDZD8-201ENST00000334464 SOCS3O14543 225 aa13.52□□□□□ -0.24
PDZD8-201ENST00000334464 LYNX1P0DP58 116 aa13.52□□□□□ -0.24
PDZD8-201ENST00000334464 ZNF48Q96MX3 618 aaPredicted RBP13.52□□□□□ -0.24
PDZD8-201ENST00000334464 UBE2E1P51965 193 aa13.52□□□□□ -0.24
PDZD8-201ENST00000334464 IGKV1-5P01602 117 aa13.52□□□□□ -0.24
PDZD8-201ENST00000334464 TET2Q6N021 2002 aaPredicted RBP13.52□□□□□ -0.25
PDZD8-201ENST00000334464 IGKV1-12A0A0C4DH73 117 aa13.52□□□□□ -0.25
PDZD8-201ENST00000334464 IGKV1D-12P01611 117 aa13.52□□□□□ -0.25
PDZD8-201ENST00000334464 Q6P435 159 aa13.52□□□□□ -0.25
PDZD8-201ENST00000334464 ZCCHC24Q8N2G6 241 aaKnown RBP13.52□□□□□ -0.25
PDZD8-201ENST00000334464 PNRC2Q9NPJ4 139 aaKnown RBP13.52□□□□□ -0.25
PDZD8-201ENST00000334464 GAGE2AQ6NT46 116 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 PSPNO60542 156 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 SRSF3P84103 164 aaKnown RBP13.51□□□□□ -0.25
PDZD8-201ENST00000334464 SUMO4Q6EEV6 95 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 IGKV1D-8A0A087WSZ0 117 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 DEFB121Q5J5C9 76 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 GTSF1LQ9H1H1 148 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 COLCA2A8K830 154 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 CFPP27918 469 aa13.51□□□□□ -0.25
PDZD8-201ENST00000334464 C17orf82Q86X59 251 aaPredicted RBP13.51□□□□□ -0.25
PDZD8-201ENST00000334464 PINLYPA6NC86 204 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 DAD1P61803 113 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 GFI1Q99684 422 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 CRIM1Q9NZV1 1036 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 THSD7BQ9C0I4 1608 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 OCIAD2Q56VL3 154 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 TRAV13-1A0A0B4J241 112 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 CITED2Q99967 270 aaPredicted RBP13.5□□□□□ -0.25
PDZD8-201ENST00000334464 PRSS46E5RG02 174 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 Q8TCH9 128 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 GAS1P54826 345 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 UBE2V1Q13404 147 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 UBE2WQ96B02 151 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 LRRK2Q5S007 2527 aa13.5□□□□□ -0.25
PDZD8-201ENST00000334464 IGHG3P01860 377 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 TMEM126AQ9H061 195 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 LHFPL4Q7Z7J7 247 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 SLAQ13239 276 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 THAP8Q8NA92 274 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 Q8TAT8 98 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 FAM110DQ8TAY7 271 aaPredicted RBP13.49□□□□□ -0.25
PDZD8-201ENST00000334464 RNASE2P10153 161 aaKnown RBP13.49□□□□□ -0.25
PDZD8-201ENST00000334464 PRB3Q04118 309 aaPredicted RBP13.49□□□□□ -0.25
PDZD8-201ENST00000334464 MSMBP08118 114 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 NDPQ00604 133 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 ZC2HC1BQ5TFG8 222 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 OR11H6Q8NGC7 330 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 UBL5Q9BZL1 73 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 NEUROG3Q9Y4Z2 214 aa13.49□□□□□ -0.25
PDZD8-201ENST00000334464 C15orf62A8K5M9 175 aa13.48□□□□□ -0.25
PDZD8-201ENST00000334464 PMVKQ15126 192 aa13.48□□□□□ -0.25
PDZD8-201ENST00000334464 C10orf55Q5SWW7 151 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms