RNA–Protein interactions for RNA: ENST00000325327.3

LMNB2-201, Transcript of lamin B2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB2, Length 4,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-201ENST00000325327 PRO1933Q9H354 126 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 ATRQ13535 2644 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 TRAV12-2A0A075B6T6 113 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 C19orf54Q5BKX5 351 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 CRIP3Q6Q6R5 217 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 C1QL4Q86Z23 238 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
LMNB2-201ENST00000325327 Q6ZPA2 131 aa13.17□□□□□ -0.3
LMNB2-201ENST00000325327 MAP1AP78559 2803 aaPredicted RBP13.17□□□□□ -0.3
LMNB2-201ENST00000325327 NDUFA4O00483 81 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 CD5P06127 495 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 DPH3Q96FX2 82 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 PRELID3AQ96N28 172 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 TMEM191AQ9H0A3 160 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 Q1RN00 199 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 TTC9CQ8N5M4 171 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
LMNB2-201ENST00000325327 F6UB75 175 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 AJUBAQ96IF1 538 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 DNAJC9-AS1A6NH13 148 aa13.16□□□□□ -0.3
LMNB2-201ENST00000325327 RCHY1Q96PM5 261 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 MGAM2Q2M2H8 2515 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 ZNF491Q8N8L2 437 aa13.15□□□□□ -0.3
LMNB2-201ENST00000325327 H7C1H1 209 aa13.15□□□□□ -0.31
LMNB2-201ENST00000325327 CFHR3Q02985 330 aa13.15□□□□□ -0.31
LMNB2-201ENST00000325327 ZNF324O75467 553 aaPredicted RBP13.14□□□□□ -0.31
LMNB2-201ENST00000325327 LEPROTL1O95214 131 aa13.14□□□□□ -0.31
LMNB2-201ENST00000325327 ZNF415Q09FC8 603 aa13.14□□□□□ -0.31
LMNB2-201ENST00000325327 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
LMNB2-201ENST00000325327 EVI2AP22794 236 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 CITED2Q99967 270 aaPredicted RBP13.13□□□□□ -0.31
LMNB2-201ENST00000325327 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 HSPB8Q9UJY1 196 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 A8MXK9 166 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 PAM16Q9Y3D7 125 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 CGB3P0DN86 165 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 CGB7P0DN87 165 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 CMC4P56277 68 aaPredicted RBP13.13□□□□□ -0.31
LMNB2-201ENST00000325327 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 LYL1P12980 280 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 LINC00477Q96M19 166 aa13.13□□□□□ -0.31
LMNB2-201ENST00000325327 LY6G6DO95868 133 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 FBLL1A6NHQ2 334 aaKnown RBP13.12□□□□□ -0.31
LMNB2-201ENST00000325327 LGALS1P09382 135 aaKnown RBP13.12□□□□□ -0.31
LMNB2-201ENST00000325327 ASPHD1Q5U4P2 390 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 GPR61Q9BZJ8 451 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 MRPL27Q9P0M9 148 aaKnown RBP13.12□□□□□ -0.31
LMNB2-201ENST00000325327 FNDC10F2Z333 226 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 K7EIM0 57 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 NMUP48645 174 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
LMNB2-201ENST00000325327 NPBQ8NG41 125 aa13.12□□□□□ -0.31
LMNB2-201ENST00000325327 IGLV2-14P01704 120 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 ST6GALNAC6Q969X2 333 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 ZMAT5Q9UDW3 170 aaKnown RBP13.11□□□□□ -0.31
LMNB2-201ENST00000325327 COL4A2P08572 1712 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 TRGV11A0A075B6L2 103 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 IGHV7-4-1A0A0J9YVY3 117 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 CXorf65A6NEN9 183 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 LY6G5BQ8NDX9 201 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 TNFRSF13BO14836 293 aaPredicted RBP13.11□□□□□ -0.31
LMNB2-201ENST00000325327 INSP01308 110 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 OR4C5Q8NGB2 326 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 C1QTNF4Q9BXJ3 329 aa13.11□□□□□ -0.31
LMNB2-201ENST00000325327 NCR2O95944 276 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 IGKV1-17P01599 117 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 HERVK_113P61574 105 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 C1orf229Q6ZS94 237 aaPredicted RBP13.1□□□□□ -0.31
LMNB2-201ENST00000325327 TEP1Q99973 2627 aaKnown RBP13.1□□□□□ -0.31
LMNB2-201ENST00000325327 TRBV19A0A075B6N1 114 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 APOHP02749 345 aaPredicted RBP13.1□□□□□ -0.31
LMNB2-201ENST00000325327 LINC01551Q86U37 167 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 HNRNPA3P51991 378 aaKnown RBP13.1□□□□□ -0.31
LMNB2-201ENST00000325327 IGHV4OR15-8A0A075B7B6 117 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 A0A087WW49 117 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 TRAV1-1A0A0B4J248 108 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 SH2D1AO60880 128 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 OSTCQ9NRP0 149 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 SMPXQ9UHP9 88 aa13.1□□□□□ -0.31
LMNB2-201ENST00000325327 A0A087WWL8 130 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 GEMIN7Q9H840 131 aaKnown RBP13.09□□□□□ -0.31
LMNB2-201ENST00000325327 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 SUMO2P61956 95 aaKnown RBP13.09□□□□□ -0.31
LMNB2-201ENST00000325327 ATOH7Q8N100 152 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 ORMDL3Q8N138 153 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 FAM19A2Q8N3H0 131 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 C14orf178Q8N769 122 aaPredicted RBP13.09□□□□□ -0.31
LMNB2-201ENST00000325327 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 CARHSP1Q9Y2V2 147 aaKnown RBP13.09□□□□□ -0.31
LMNB2-201ENST00000325327 IGKV3D-20A0A0C4DH25 116 aa13.09□□□□□ -0.31
LMNB2-201ENST00000325327 IGLV2-23P01705 113 aa13.08□□□□□ -0.32
LMNB2-201ENST00000325327 CTSGP08311 255 aa13.08□□□□□ -0.32
LMNB2-201ENST00000325327 SRSF9Q13242 221 aaKnown RBP eCLIP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms