RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 LGALS9O00182 355 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 TRGC2P03986 189 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 SAPCD1Q5SSQ6 148 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 REC114Q7Z4M0 266 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 ZFP82Q8N141 532 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 OR4B1Q8NGF8 309 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 SMPXQ9UHP9 88 aa13.62□□□□□ -0.23
RAB39A-201ENST00000320578 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
RAB39A-201ENST00000320578 NPIPB6E9PJ23 425 aa13.61□□□□□ -0.23
RAB39A-201ENST00000320578 COX19Q49B96 90 aa13.61□□□□□ -0.23
RAB39A-201ENST00000320578 Q6ZSV7 163 aa13.61□□□□□ -0.23
RAB39A-201ENST00000320578 C8orf86Q6ZUL3 223 aa13.61□□□□□ -0.23
RAB39A-201ENST00000320578 ZFHX3Q15911 3703 aa13.61□□□□□ -0.23
RAB39A-201ENST00000320578 IGHV3OR16-13A0A075B7E8 117 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 IGHV3-74A0A0B4J1X5 117 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 TRAV8-2A0A0B4J237 113 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
RAB39A-201ENST00000320578 CDX1P47902 265 aaPredicted RBP13.6□□□□□ -0.23
RAB39A-201ENST00000320578 KLHDC1Q8N7A1 406 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 ESM1Q9NQ30 184 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 IGHV3-49A0A0A0MS15 119 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 FAM231BA6NCW3 169 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 A8MWP6 167 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 SAMD13Q5VXD3 122 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 TSKUQ8WUA8 353 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 DAZAP1Q96EP5 407 aaKnown RBP13.6□□□□□ -0.23
RAB39A-201ENST00000320578 RHPN1-AS1Q9BWJ2 59 aa13.6□□□□□ -0.23
RAB39A-201ENST00000320578 P01737 135 aa13.59□□□□□ -0.23
RAB39A-201ENST00000320578 S100A6P06703 90 aa13.59□□□□□ -0.23
RAB39A-201ENST00000320578 ACTL10Q5JWF8 245 aa13.59□□□□□ -0.23
RAB39A-201ENST00000320578 PRR27Q6MZM9 219 aa13.59□□□□□ -0.23
RAB39A-201ENST00000320578 GBGT1Q8N5D6 347 aa13.59□□□□□ -0.23
RAB39A-201ENST00000320578 GFRA4Q9GZZ7 299 aa13.59□□□□□ -0.23
RAB39A-201ENST00000320578 RPP21Q9H633 154 aaKnown RBP13.59□□□□□ -0.23
RAB39A-201ENST00000320578 ZNF469Q96JG9 3925 aaPredicted RBP13.58□□□□□ -0.23
RAB39A-201ENST00000320578 IZUMO1RA6ND01 250 aa13.58□□□□□ -0.24
RAB39A-201ENST00000320578 C5orf52A6NGY3 159 aa13.58□□□□□ -0.24
RAB39A-201ENST00000320578 TM4SF20Q53R12 229 aa13.58□□□□□ -0.24
RAB39A-201ENST00000320578 LINC00322Q6ZN03 302 aaPredicted RBP13.58□□□□□ -0.24
RAB39A-201ENST00000320578 ZNF418Q8TF45 676 aaPredicted RBP13.58□□□□□ -0.24
RAB39A-201ENST00000320578 WIPF2Q8TF74 440 aaPredicted RBP13.58□□□□□ -0.24
RAB39A-201ENST00000320578 C16orf95Q9H693 158 aa13.58□□□□□ -0.24
RAB39A-201ENST00000320578 PPP1R14DQ9NXH3 145 aa13.58□□□□□ -0.24
RAB39A-201ENST00000320578 A8MWL6 223 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 SOCS3O14543 225 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 AKAP9Q99996 3911 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 IGKV2-40A0A087WW87 121 aaPredicted RBP13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BKO60814 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 IGKV2D-40P01614 121 aaPredicted RBP13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BJP06899 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 SRD5A1P18405 259 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BOP23527 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HLA-DMBP28068 263 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BBP33778 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BDP58876 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BCP62807 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST2H2BEQ16778 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.57□□□□□ -0.24
RAB39A-201ENST00000320578 FRZBQ92765 325 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BHQ93079 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 ZC2HC1AQ96GY0 325 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 C16orf92Q96LL3 132 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 PRR25Q96S07 402 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BNQ99877 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 HIST1H2BMQ99879 126 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 NRN1Q9NPD7 142 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 NAT8BQ9UHF3 227 aa13.57□□□□□ -0.24
RAB39A-201ENST00000320578 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
RAB39A-201ENST00000320578 TLN2Q9Y4G6 2542 aa13.56□□□□□ -0.24
RAB39A-201ENST00000320578 HILS1P60008 231 aa13.56□□□□□ -0.24
RAB39A-201ENST00000320578 C4orf3Q8WVX3 66 aa13.56□□□□□ -0.24
RAB39A-201ENST00000320578 TMEM213A2RRL7 107 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 ZNF705FA8MVS1 300 aaPredicted RBP13.55□□□□□ -0.24
RAB39A-201ENST00000320578 TRGC1P0CF51 173 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 CT45A10P0DMU9 189 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 IGFL4Q6B9Z1 124 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 WDR73Q6P4I2 378 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 GNB1LQ9BYB4 327 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 IGHV4OR15-8A0A075B7B6 117 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 A0A087WW49 117 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 C9orf47Q6ZRZ4 202 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 JMJD8Q96S16 334 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 VGLL1Q99990 258 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 NDFIP1Q9BT67 221 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 SAV1Q9H4B6 383 aaPredicted RBP13.55□□□□□ -0.24
RAB39A-201ENST00000320578 TRAPPC1Q9Y5R8 145 aa13.55□□□□□ -0.24
RAB39A-201ENST00000320578 HECTD1Q9ULT8 2610 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 UBE2CO00762 179 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 LY6G6DO95868 133 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 MT-ND6P03923 174 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 FOSL1P15407 271 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 FOXA3P55318 350 aaPredicted RBP13.54□□□□□ -0.24
RAB39A-201ENST00000320578 KLF5Q13887 457 aaPredicted RBP13.54□□□□□ -0.24
RAB39A-201ENST00000320578 ATP5L2Q7Z4Y8 100 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 RNF182Q8N6D2 247 aa13.54□□□□□ -0.24
RAB39A-201ENST00000320578 PRAC2D3DTV9 90 aa13.53□□□□□ -0.24
RAB39A-201ENST00000320578 CA1P00915 261 aaPredicted RBP13.53□□□□□ -0.24
RAB39A-201ENST00000320578 HOXD3P31249 432 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 451.3 ms