RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 PPIAL4EA0A075B759 164 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 PPIAL4FP0DN26 164 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 HERV-K104P63124 156 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 ETDBQ3ZM63 59 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 RPEQ96AT9 228 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 JKAMPQ9P055 326 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 MUC6Q6W4X9 2439 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 K7EQM0 130 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 TRAV17A0A0B4J275 112 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 NDUFA3O95167 84 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 NPYP01303 97 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 FMC1Q96HJ9 113 aa11.29□□□□□ -0.6
PABPC1-201ENST00000318607 TRAV26-2A0A0B4J265 109 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 FXYD2P54710 66 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 SAMD5Q5TGI4 173 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 TRAV26-1A0A087WT03 109 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 PSMB11A5LHX3 300 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 LEPP41159 167 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 FAM71F2Q6NXP2 309 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 SPTBN4Q9H254 2564 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 ID1P41134 155 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 SAMD13Q5VXD3 122 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 ATP5L2Q7Z4Y8 100 aa11.28□□□□□ -0.6
PABPC1-201ENST00000318607 WIPF2Q8TF74 440 aaPredicted RBP11.28□□□□□ -0.6
PABPC1-201ENST00000318607 H3BMG7 143 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 CGB3P0DN86 165 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 CGB7P0DN87 165 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 PAX2Q02962 417 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 SMIM12Q96EX1 92 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 ZNF48Q96MX3 618 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-201ENST00000318607 DKK4Q9UBT3 224 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 CD40P25942 277 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 AAMDCQ9H7C9 122 aa11.27□□□□□ -0.61
PABPC1-201ENST00000318607 IGKV2D-26A0A0A0MRZ7 120 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 CRYBA4P53673 196 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 EMP1P54849 157 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 C3orf36Q3SXR2 165 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 CACNA1AO00555 2505 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 K7EM74 188 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 ERCC8Q13216 396 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 WFDC2Q14508 124 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 SEM1Q6ZVN7 128 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 ORMDL3Q8N138 153 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 PRSS33Q8NF86 280 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 ARPC1AQ92747 370 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 BSPH1Q075Z2 132 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 C8orf46Q8TAG6 207 aa11.26□□□□□ -0.61
PABPC1-201ENST00000318607 TSSC4Q9Y5U2 329 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-201ENST00000318607 C9orf118A6NHY6 69 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-201ENST00000318607 CD59P13987 128 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 GP9P14770 177 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 ARL3P36405 182 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-201ENST00000318607 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 CRIP1P50238 77 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 ZC2HC1BQ5TFG8 222 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 RASL11AQ6T310 242 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 TMEM167AQ8TBQ9 72 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 NGBQ9NPG2 151 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 PTPRQQ9UMZ3 2332 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 SMAD7O15105 426 aaKnown RBP11.25□□□□□ -0.61
PABPC1-201ENST00000318607 SMIM13P0DJ93 91 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 AZU1P20160 251 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 ADAMTSL5Q6ZMM2 481 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 PPP1R27Q86WC6 154 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 MLST8Q9BVC4 326 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 C7orf69Q9H7B7 122 aa11.25□□□□□ -0.61
PABPC1-201ENST00000318607 ATP5G2Q06055 141 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 MRPL51Q4U2R6 128 aaKnown RBP11.24□□□□□ -0.61
PABPC1-201ENST00000318607 LINC01545Q5VT33 79 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 LOC107984156A0A0G2JMH3 177 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 PPBPP02775 128 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 ARL17AQ8IVW1 177 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 CTSZQ9UBR2 303 aa11.24□□□□□ -0.61
PABPC1-201ENST00000318607 TRAV40A0A0B4J280 105 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 ZNF785A8K8V0 405 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 LHBP01229 141 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 ATP5J2P56134 94 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-201ENST00000318607 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 NDFIP1Q9BT67 221 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 SH2D1AO60880 128 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 IGLV1-44P01699 117 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 KLRD1Q13241 179 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 SCNM1Q9BWG6 230 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 HBDP02042 147 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 SP9P0CG40 484 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 VGLL1Q99990 258 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 SRSF8Q9BRL6 282 aaKnown RBP11.23□□□□□ -0.61
PABPC1-201ENST00000318607 SPRY4Q9C004 299 aa11.23□□□□□ -0.61
PABPC1-201ENST00000318607 POLQO75417 2590 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 H7C2G1 150 aa11.22□□□□□ -0.61
PABPC1-201ENST00000318607 CDX4O14627 284 aaPredicted RBP11.22□□□□□ -0.61
PABPC1-201ENST00000318607 EFNA4P52798 201 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms