RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 FAM3BP58499 235 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 SEPSECSQ9HD40 501 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 MYO18BQ8IUG5 2567 aa6.76□□□□□ -1.33
PDLIM5-201ENST00000317968 RHODO00212 210 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 IGLC1P0CG04 106 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 RIPPLY3P57055 190 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 BRCA2P51587 3418 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 TRBV9A0A0B4J1U6 114 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 SH2D6Q7Z4S9 175 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM256Q8N2U0 113 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 WFDC11Q8NEX6 87 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 SLC25A39Q9BZJ4 359 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 IGLV11-55A0A075B6I3 123 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 IGHV7-81A0A0B4J1V7 117 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 PSG3Q16557 428 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 NUDT10Q8NFP7 164 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 IMMP2LQ96T52 175 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 ZNF580Q9UK33 172 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 IGHG2P01859 326 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 MUC21Q5SSG8 566 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 LOC389332A0A1B0GUA5 103 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 RARRES2Q99969 163 aa6.75□□□□□ -1.33
PDLIM5-201ENST00000317968 ZNF98A6NK75 572 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 CNTFRP26992 372 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 OSTCQ9NRP0 149 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 A6NDX4 124 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 Q8N6K4 173 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 C5orf56Q8N8D9 126 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM70Q9BUB7 260 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 RNF224P0DH78 156 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 IER3P46695 156 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM183BQ1AE95 376 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 PSG8Q9UQ74 426 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 IGHV7-4-1A0A0J9YVY3 117 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 TEX22C9J3V5 150 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 DEFB130BP0DP73 79 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 DEFB130AP0DP74 79 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 RPP21Q9H633 154 aaKnown RBP6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 TPSG1Q9NRR2 321 aa6.74□□□□□ -1.33
PDLIM5-201ENST00000317968 IFI27P40305 119 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 CDX1P47902 265 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 CCL18P55774 89 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 PRR31Q5SQ13 230 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 UBE2CO00762 179 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 PSMB2P49721 201 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 C11orf52Q96A22 123 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 VSIRQ9H7M9 311 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 I3L2K1 104 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 HBBP68871 147 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 ZNF502Q8TBZ5 544 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 BBC3Q96PG8 261 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 A0A1W2PPR1 153 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 LINC00587B1AMM8 73 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 GATA2P23769 480 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 NDPQ00604 133 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM37Q8WXS4 190 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 IGF1P05019 195 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 EVI2AP22794 236 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 HOXD3P31249 432 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM88Q6PEY1 159 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 PRELID3AQ96N28 172 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 FNDC4Q9H6D8 234 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 C5orf42Q9H799 3197 aa6.73□□□□□ -1.33
PDLIM5-201ENST00000317968 TGIF2-C20orf24A0A0A6YYL0 155 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 IQCJQ1A5X6 159 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 CENPWQ5EE01 88 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 C8orf86Q6ZUL3 223 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 LAMA3Q16787 3333 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 A6NJY4 79 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 BRI3O95415 125 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 FABP4P15090 132 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 RPL35P42766 123 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 RNF152Q8N8N0 203 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 G3V318 75 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 SPXQ9BT56 116 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 COX6CP09669 75 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 SPART-AS1P0CW21 52 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 SS18Q15532 418 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 FOXI2Q6ZQN5 318 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 FAM24BQ8N5W8 94 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 ZNF462Q96JM2 2506 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 EPG5Q9HCE0 2579 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 TRAV12-3A0A0B4J271 114 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 K7EIM0 57 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 ATP5LO75964 103 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 SFRP2Q96HF1 295 aa6.72□□□□□ -1.33
PDLIM5-201ENST00000317968 NAV3Q8IVL0 2385 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 H3BRN7 92 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 GZMBP10144 247 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 SEC11AP67812 179 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 Q6YL49 198 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 ATP5G3P48201 142 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 XCL2Q9UBD3 114 aa6.71□□□□□ -1.33
PDLIM5-201ENST00000317968 PRSS46E5RG02 174 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms