RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 CLEC19AQ6UXS0 136 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 ZNF705AQ6ZN79 300 aaPredicted RBP11.45□□□□□ -0.58
CLK4-201ENST00000316308 TMEM75Q8N9X5 138 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 MCRIP2Q9BUT9 160 aaKnown RBP11.45□□□□□ -0.58
CLK4-201ENST00000316308 SELENOKQ9Y6D0 94 aa11.45□□□□□ -0.58
CLK4-201ENST00000316308 TRAV30A0A087WSZ9 112 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 HSBP1O75506 76 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 DOPEY2Q9Y3R5 2298 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 OOSP1A8MZH6 123 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 CSN3P07498 182 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 CT83Q5H943 113 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 ATP5L2Q7Z4Y8 100 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 ZNF502Q8TBZ5 544 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 PIFOQ8TCI5 191 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 VAMP8Q9BV40 100 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 PTPN13Q12923 2485 aa11.44□□□□□ -0.58
CLK4-201ENST00000316308 TRAV40A0A0B4J280 105 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 CLPSL1A2RUU4 121 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 M0R2Z0 102 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 IGHV4-38-2P0DP08 117 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 ERCC8Q13216 396 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 KLF5Q13887 457 aaPredicted RBP11.43□□□□□ -0.58
CLK4-201ENST00000316308 ZNF575Q86XF7 245 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 CHEK1O14757 476 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 ZNF48Q96MX3 618 aaPredicted RBP11.43□□□□□ -0.58
CLK4-201ENST00000316308 ZFAND3Q9H8U3 227 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 THYN1Q9P016 225 aa11.43□□□□□ -0.58
CLK4-201ENST00000316308 TMEM213A2RRL7 107 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 TIMM8BQ9Y5J9 83 aaPredicted RBP11.42□□□□□ -0.58
CLK4-201ENST00000316308 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
CLK4-201ENST00000316308 LOC102724200A0A096LPH7 203 aaPredicted RBP11.42□□□□□ -0.58
CLK4-201ENST00000316308 C2orf70A6NJV1 201 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 LY6EQ16553 131 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 Q6ZQT7 251 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 Q6ZS46 218 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 C5orf56Q8N8D9 126 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 FAM110DQ8TAY7 271 aaPredicted RBP11.42□□□□□ -0.58
CLK4-201ENST00000316308 AAMDCQ9H7C9 122 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
CLK4-201ENST00000316308 CTRLP40313 264 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 LCNL1Q6ZST4 164 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 GFRA4Q9GZZ7 299 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 ZFP30Q9Y2G7 519 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 EPG5Q9HCE0 2579 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 IGHV4-30-2A0A087WSY4 118 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 SH2D1AO60880 128 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 FAM106AQ4KMX7 169 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 LYPD1Q8N2G4 141 aa11.41□□□□□ -0.58
CLK4-201ENST00000316308 TRBV12-3P01733 135 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 RELQ04864 619 aaPredicted RBP11.4□□□□□ -0.58
CLK4-201ENST00000316308 SPATA45Q537H7 98 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 C20orf144Q9BQM9 153 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 C2orf88Q9BSF0 95 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 ZMAT5Q9UDW3 170 aaKnown RBP11.4□□□□□ -0.58
CLK4-201ENST00000316308 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 HAX1O00165 279 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 BUB3O43684 328 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 PRB1P04280 392 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 BORCS7Q96B45 105 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 PRR25Q96S07 402 aa11.4□□□□□ -0.58
CLK4-201ENST00000316308 A0A1B0GUT8 65 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 RPL7P18124 248 aaKnown RBP11.39□□□□□ -0.59
CLK4-201ENST00000316308 PDE6HQ13956 83 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 TRBV6-1A0A0K0K1D8 114 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 K7EQM0 130 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 RAB4AP20338 218 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 FXYD7P58549 80 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 PAX8Q06710 450 aa11.39□□□□□ -0.59
CLK4-201ENST00000316308 AVPP01185 164 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 SFTPCP11686 197 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 CCL19Q99731 98 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 MIEN1Q9BRT3 115 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 MSRB1Q9NZV6 116 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 RNF24Q9Y225 148 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 DEFB1P60022 68 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 BATFQ16520 125 aa11.38□□□□□ -0.59
CLK4-201ENST00000316308 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 PPIFP30405 207 aaKnown RBP11.37□□□□□ -0.59
CLK4-201ENST00000316308 LOXL1Q08397 574 aaPredicted RBP11.37□□□□□ -0.59
CLK4-201ENST00000316308 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.37□□□□□ -0.59
CLK4-201ENST00000316308 FAM231BA6NCW3 169 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 H0Y8G0 127 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 CSN1S1P47710 185 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 BLCAPP62952 87 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 AMN1Q8IY45 258 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 PMCHL2Q9BQD1 86 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 TLN2Q9Y4G6 2542 aa11.37□□□□□ -0.59
CLK4-201ENST00000316308 SERTM2A0A1B0GWG4 89 aa11.36□□□□□ -0.59
CLK4-201ENST00000316308 SMKR1H3BMG3 65 aa11.36□□□□□ -0.59
CLK4-201ENST00000316308 CT45A10P0DMU9 189 aa11.36□□□□□ -0.59
CLK4-201ENST00000316308 TEX15Q9BXT5 2789 aa11.36□□□□□ -0.59
CLK4-201ENST00000316308 IGHV1-69DA0A0B4J2H0 117 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms