RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 CHAC1Q9BUX1 264 aa11.59□□□□□ -0.55
COL6A2-201ENST00000300527 NBASA2RRP1 2371 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 CD40P25942 277 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 UBALD2Q8IYN6 164 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 IGLV3-9A0A075B6K5 115 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 LAMA5O15230 3695 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 H3BMG7 143 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 GATA4P43694 442 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 SIGLEC9Q9Y336 463 aa11.58□□□□□ -0.56
COL6A2-201ENST00000300527 IGKV1-17P01599 117 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 CRYGCP07315 174 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 MC5RP33032 325 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 PPP1R27Q86WC6 154 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 SIGMAR1Q99720 223 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 ZGRF1Q86YA3 2104 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 SIGLEC15Q6ZMC9 328 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 NCOR1P1Q9H4R4 102 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 DYNLRB1Q9NP97 96 aa11.57□□□□□ -0.56
COL6A2-201ENST00000300527 LYNX1G3V0Z9 82 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.56□□□□□ -0.56
COL6A2-201ENST00000300527 LYNX1P0DP58 116 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 ATMQ13315 3056 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 CD59P13987 128 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 PRSS33Q8NF86 280 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 RNF125Q96EQ8 232 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 CTSZQ9UBR2 303 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 HES1Q14469 280 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 KLK15Q9H2R5 256 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 CSMD1Q96PZ7 3565 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 ACACAQ13085 2346 aa11.56□□□□□ -0.56
COL6A2-201ENST00000300527 RPEQ96AT9 228 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 MAP1LC3AQ9H492 121 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 SPTBN1Q01082 2364 aaKnown RBP11.55□□□□□ -0.56
COL6A2-201ENST00000300527 FAM169BQ8N8A8 192 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 ZZEF1O43149 2961 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 APC2O95996 2303 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 C17orf100A8MU93 164 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 EGR2P11161 476 aaPredicted RBP11.55□□□□□ -0.56
COL6A2-201ENST00000300527 MRGPRG-AS1Q2M3A8 158 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 CLUHP3Q96NS8 147 aa11.55□□□□□ -0.56
COL6A2-201ENST00000300527 SPTA1P02549 2419 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 IGHV3OR16-13A0A075B7E8 117 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 IGHV3-74A0A0B4J1X5 117 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 OVOL3O00110 214 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 IGHV1-8P0DP01 117 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 SHANK2-AS3Q9BTD1 123 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 UFC1Q9Y3C8 167 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 INS-IGF2F8WCM5 200 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 NDUFA3O95167 84 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 ZNF479Q96JC4 524 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 VGLL1Q99990 258 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 LINC00574Q9H8X3 128 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 TMEM30BQ3MIR4 351 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 TMEM158Q8WZ71 300 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 HIST1H4GQ99525 98 aa11.54□□□□□ -0.56
COL6A2-201ENST00000300527 TRBV25-1A0A075B6N4 114 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 A0A1B0GW15 77 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 LOXP28300 417 aaPredicted RBP11.53□□□□□ -0.56
COL6A2-201ENST00000300527 TEX36Q5VZQ5 186 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 DMXL1Q9Y485 3027 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 SPAARA0A1B0GVQ0 90 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 GAGE12HA6NDE8 117 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 TMEM8BA6NDV4 472 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 IGKCP01834 107 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 ATP5G2Q06055 141 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 Q6AWC8 147 aa11.53□□□□□ -0.56
COL6A2-201ENST00000300527 IGHV3-66A0A0C4DH42 116 aa11.52□□□□□ -0.56
COL6A2-201ENST00000300527 TEX22C9J3V5 150 aa11.52□□□□□ -0.57
COL6A2-201ENST00000300527 ZNF80P51504 273 aaPredicted RBP11.52□□□□□ -0.57
COL6A2-201ENST00000300527 TMEM178BH3BS89 294 aa11.52□□□□□ -0.57
COL6A2-201ENST00000300527 J3KRW8 73 aa11.52□□□□□ -0.57
COL6A2-201ENST00000300527 ADIPOQQ15848 244 aa11.52□□□□□ -0.57
COL6A2-201ENST00000300527 DEFB104AQ8WTQ1 72 aa11.52□□□□□ -0.57
COL6A2-201ENST00000300527 TMEM14CQ9P0S9 112 aa11.52□□□□□ -0.57
COL6A2-201ENST00000300527 TRAV26-2A0A0B4J265 109 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 IGHV1-3A0A0C4DH29 117 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 J3QR89 54 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 FTH1P19P0C7X4 201 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 INSL3P51460 131 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 ERCC8Q13216 396 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 CHTOPQ9Y3Y2 248 aaKnown RBP11.51□□□□□ -0.57
COL6A2-201ENST00000300527 FAM215AQ9Y5M1 114 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 ARHGAP32A7KAX9 2087 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 AGRNO00468 2067 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 I3L2K1 104 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 BSPH1Q075Z2 132 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 H3BRN7 92 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 CDX4O14627 284 aaPredicted RBP11.51□□□□□ -0.57
COL6A2-201ENST00000300527 SCGB2A2Q13296 93 aa11.51□□□□□ -0.57
COL6A2-201ENST00000300527 A0A1B0GWB2 263 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 WI2-2373I1.2A0A1W2PRP0 233 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 ODF1Q14990 250 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 DPF1Q92782 380 aa11.5□□□□□ -0.57
COL6A2-201ENST00000300527 MRPL35Q9NZE8 188 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms