RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 DEFB1P60022 68 aa16.66■□□□□ 0.26
LINC01116-201ENST00000295549 GDF5OSQ5U4N7 250 aa16.66■□□□□ 0.26
LINC01116-201ENST00000295549 ZNF705FA8MVS1 300 aaPredicted RBP16.65■□□□□ 0.26
LINC01116-201ENST00000295549 ICAM4Q14773 271 aa16.65■□□□□ 0.26
LINC01116-201ENST00000295549 ALKAL2Q6UX46 152 aa16.65■□□□□ 0.26
LINC01116-201ENST00000295549 TRPT1Q86TN4 253 aaKnown RBP16.65■□□□□ 0.26
LINC01116-201ENST00000295549 Q9H3A6 140 aa16.65■□□□□ 0.26
LINC01116-201ENST00000295549 KIR2DL5BA0A0G2JN68 375 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 KIR2DL5BA0A0G2JPC4 375 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 F6UB75 175 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 FAM74A1Q5RGS3 127 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 KIR2DL5AQ8N109 375 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 KIR2DL5BQ8NHK3 375 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 CLUHP3Q96NS8 147 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 TMPRSS5Q9H3S3 457 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 OTORQ9NRC9 128 aa16.64■□□□□ 0.25
LINC01116-201ENST00000295549 TRAV1-1A0A0B4J248 108 aa16.63■□□□□ 0.25
LINC01116-201ENST00000295549 M0R3E3 92 aa16.63■□□□□ 0.25
LINC01116-201ENST00000295549 RPL35AP18077 110 aaKnown RBP16.63■□□□□ 0.25
LINC01116-201ENST00000295549 IQCF2Q8IXL9 164 aa16.63■□□□□ 0.25
LINC01116-201ENST00000295549 OR8A1Q8NGG7 326 aa16.63■□□□□ 0.25
LINC01116-201ENST00000295549 B9D2Q9BPU9 175 aa16.63■□□□□ 0.25
LINC01116-201ENST00000295549 HAGHQ16775 308 aa16.62■□□□□ 0.25
LINC01116-201ENST00000295549 A0A1W2PRE2 83 aa16.62■□□□□ 0.25
LINC01116-201ENST00000295549 A8MTW9 85 aa16.62■□□□□ 0.25
LINC01116-201ENST00000295549 PRAC2D3DTV9 90 aa16.62■□□□□ 0.25
LINC01116-201ENST00000295549 DUSP14O95147 198 aaKnown RBP16.62■□□□□ 0.25
LINC01116-201ENST00000295549 APOC4P55056 127 aa16.62■□□□□ 0.25
LINC01116-201ENST00000295549 PGPA6NDG6 321 aa16.61■□□□□ 0.25
LINC01116-201ENST00000295549 SBSPONQ8IVN8 264 aa16.61■□□□□ 0.25
LINC01116-201ENST00000295549 ARL6IP6Q8N6S5 226 aa16.61■□□□□ 0.25
LINC01116-201ENST00000295549 RXFP4Q8TDU9 374 aa16.61■□□□□ 0.25
LINC01116-201ENST00000295549 CSTL1Q9H114 145 aa16.61■□□□□ 0.25
LINC01116-201ENST00000295549 ZNF705EA8MWA4 302 aaPredicted RBP16.6■□□□□ 0.25
LINC01116-201ENST00000295549 CSN1S1P47710 185 aa16.6■□□□□ 0.25
LINC01116-201ENST00000295549 CNN1P51911 297 aaKnown RBP16.6■□□□□ 0.25
LINC01116-201ENST00000295549 MORN3Q6PF18 240 aaPredicted RBP16.6■□□□□ 0.25
LINC01116-201ENST00000295549 OR4B1Q8NGF8 309 aa16.6■□□□□ 0.25
LINC01116-201ENST00000295549 OR10J6PQ8NGY7 276 aa16.6■□□□□ 0.25
LINC01116-201ENST00000295549 AGRNO00468 2067 aa16.59■□□□□ 0.25
LINC01116-201ENST00000295549 TEX46H3BTG2 121 aa16.59■□□□□ 0.25
LINC01116-201ENST00000295549 UBE2CO00762 179 aa16.59■□□□□ 0.25
LINC01116-201ENST00000295549 ZNF705DP0CH99 300 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-201ENST00000295549 ZNF705BP0CI00 300 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-201ENST00000295549 NUTF2P61970 127 aaKnown RBP16.59■□□□□ 0.25
LINC01116-201ENST00000295549 HIST1H1AQ02539 215 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-201ENST00000295549 TEX261Q6UWH6 196 aa16.59■□□□□ 0.25
LINC01116-201ENST00000295549 NKX6-2Q9C056 277 aaPredicted RBP16.59■□□□□ 0.25
LINC01116-201ENST00000295549 ARL2-SNX15V9GYD0 113 aa16.59■□□□□ 0.25
LINC01116-201ENST00000295549 HBE1P02100 147 aa16.58■□□□□ 0.24
LINC01116-201ENST00000295549 CMTM2Q8TAZ6 248 aa16.58■□□□□ 0.24
LINC01116-201ENST00000295549 YTHDF2Q9Y5A9 579 aaKnown RBP16.58■□□□□ 0.24
LINC01116-201ENST00000295549 A0A1B0GV50 99 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 FAM74A7A6NL05 159 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 GGTLC3B5MD39 225 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 IGKV3-20P01619 116 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 PRB4P10163 310 aaPredicted RBP16.57■□□□□ 0.24
LINC01116-201ENST00000295549 PPT1P50897 306 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 SUMO1P63165 101 aaKnown RBP16.57■□□□□ 0.24
LINC01116-201ENST00000295549 BLOC1S1P78537 153 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 DNAH9Q9NYC9 4486 aa16.57■□□□□ 0.24
LINC01116-201ENST00000295549 DIRC3C9JPN6 131 aa16.56■□□□□ 0.24
LINC01116-201ENST00000295549 UBE2G2P60604 165 aa16.56■□□□□ 0.24
LINC01116-201ENST00000295549 AMTNQ6UX39 209 aa16.56■□□□□ 0.24
LINC01116-201ENST00000295549 C5orf17Q8NAS9 161 aa16.56■□□□□ 0.24
LINC01116-201ENST00000295549 RBAKDNA6NC62 111 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 NPIPB6E9PJ23 425 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 GIG44P09565 113 aaPredicted RBP16.55■□□□□ 0.24
LINC01116-201ENST00000295549 CCL20P78556 96 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 C9orf47Q6ZRZ4 202 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 Q6ZWC4 215 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 ZNF680Q8NEM1 530 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 ASCL2Q99929 193 aa16.55■□□□□ 0.24
LINC01116-201ENST00000295549 CA1P00915 261 aaPredicted RBP16.54■□□□□ 0.24
LINC01116-201ENST00000295549 IFNA7P01567 189 aa16.54■□□□□ 0.24
LINC01116-201ENST00000295549 SLC25A5P05141 298 aaKnown RBP16.54■□□□□ 0.24
LINC01116-201ENST00000295549 PMS2P11Q13670 270 aa16.54■□□□□ 0.24
LINC01116-201ENST00000295549 LINC00477Q96M19 166 aa16.54■□□□□ 0.24
LINC01116-201ENST00000295549 TM2D3Q9BRN9 247 aa16.54■□□□□ 0.24
LINC01116-201ENST00000295549 IGKV2-40A0A087WW87 121 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-201ENST00000295549 IGKV2D-40P01614 121 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-201ENST00000295549 NHLRC4P0CG21 123 aaPredicted RBP16.53■□□□□ 0.24
LINC01116-201ENST00000295549 LYPD6BQ8NI32 183 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 AGPAT4-IT1Q9H0P7 198 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 EPDR1Q9UM22 224 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 PAGE4O60829 102 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 CCDC28AQ8IWP9 274 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 ODF3Q96PU9 254 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 VGLL1Q99990 258 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 C1QTNF4Q9BXJ3 329 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 SLC35B3Q9H1N7 401 aa16.53■□□□□ 0.24
LINC01116-201ENST00000295549 SERTM2A0A1B0GWG4 89 aa16.52■□□□□ 0.23
LINC01116-201ENST00000295549 TCRAP04437 139 aa16.52■□□□□ 0.23
LINC01116-201ENST00000295549 ERCC8Q13216 396 aa16.52■□□□□ 0.23
LINC01116-201ENST00000295549 TCEAL7Q9BRU2 100 aa16.52■□□□□ 0.23
LINC01116-201ENST00000295549 MANBALQ9NQG1 85 aa16.52■□□□□ 0.23
LINC01116-201ENST00000295549 PPP1R14DQ9NXH3 145 aa16.52■□□□□ 0.23
LINC01116-201ENST00000295549 NBEAL2Q6ZNJ1 2754 aa16.51■□□□□ 0.23
LINC01116-201ENST00000295549 CT45A10P0DMU9 189 aa16.51■□□□□ 0.23
LINC01116-201ENST00000295549 GNG5P63218 68 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms