RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 FSTL3O95633 263 aa11.98□□□□□ -0.49
SEC16A-202ENST00000290037 PYYP10082 97 aa11.98□□□□□ -0.49
SEC16A-202ENST00000290037 EFNA2O43921 213 aa11.98□□□□□ -0.49
SEC16A-202ENST00000290037 JPT2Q9H910 190 aa11.98□□□□□ -0.49
SEC16A-202ENST00000290037 IGKV1D-8A0A087WSZ0 117 aa11.98□□□□□ -0.49
SEC16A-202ENST00000290037 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
SEC16A-202ENST00000290037 ZNF48Q96MX3 618 aaPredicted RBP11.98□□□□□ -0.49
SEC16A-202ENST00000290037 TRBV19A0A075B6N1 114 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 PPDPFLQ8WWR9 84 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 EDA2RQ9HAV5 297 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 LYZL1Q6UWQ5 148 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 GPHA2Q96T91 129 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 MESP1Q9BRJ9 268 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 MSRB2Q9Y3D2 182 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 RNF138Q8WVD3 245 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 GUSBP1Q15486 140 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 CXCL1P09341 107 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 IFITM1P13164 125 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 CEACAM8P31997 349 aaPredicted RBP11.97□□□□□ -0.49
SEC16A-202ENST00000290037 PRDM6Q9NQX0 595 aa11.97□□□□□ -0.49
SEC16A-202ENST00000290037 IGHG4P01861 327 aa11.96□□□□□ -0.49
SEC16A-202ENST00000290037 ELANEP08246 267 aa11.96□□□□□ -0.49
SEC16A-202ENST00000290037 A0A087WX48 190 aa11.96□□□□□ -0.49
SEC16A-202ENST00000290037 MEGF9Q9H1U4 602 aa11.96□□□□□ -0.49
SEC16A-202ENST00000290037 MLNRO43193 412 aa11.96□□□□□ -0.5
SEC16A-202ENST00000290037 HLA-DMBP28068 263 aa11.96□□□□□ -0.5
SEC16A-202ENST00000290037 NTF4P34130 210 aa11.96□□□□□ -0.5
SEC16A-202ENST00000290037 GNG5P63218 68 aa11.96□□□□□ -0.5
SEC16A-202ENST00000290037 SRRM4A7MD48 611 aaKnown RBP11.96□□□□□ -0.5
SEC16A-202ENST00000290037 MED14OSP0DP75 135 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 HERVK_113P63121 156 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 COX8AP10176 69 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 APOC4P55056 127 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 BEX4Q9NWD9 120 aaPredicted RBP11.95□□□□□ -0.5
SEC16A-202ENST00000290037 H3BRN7 92 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 A0A1B0GUS0 222 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 KRTAP27-1Q3LI81 207 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 HERV-K104P63124 156 aa11.95□□□□□ -0.5
SEC16A-202ENST00000290037 IGHV3OR16-12A0A075B7B8 117 aa11.94□□□□□ -0.5
SEC16A-202ENST00000290037 LINC00473A8K010 186 aa11.94□□□□□ -0.5
SEC16A-202ENST00000290037 C9orf118A6NHY6 69 aa11.94□□□□□ -0.5
SEC16A-202ENST00000290037 C3orf79P0CE67 100 aa11.94□□□□□ -0.5
SEC16A-202ENST00000290037 COL5A1P20908 1838 aaPredicted RBP11.94□□□□□ -0.5
SEC16A-202ENST00000290037 TMEM105Q8N8V8 129 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 C1orf147Q96MC9 270 aaPredicted RBP11.93□□□□□ -0.5
SEC16A-202ENST00000290037 KIAA1549Q9HCM3 1950 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 F8VRH5 84 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 IGHV2-70DA0A0C4DH43 119 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 IGHV2-5P01817 119 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 GAGE12BA1L429 117 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 CHCHD5Q9BSY4 110 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 SRSF3P84103 164 aaKnown RBP11.93□□□□□ -0.5
SEC16A-202ENST00000290037 KIR3DS1Q14943 382 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 A0A0G2JNJ9 132 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 TNFRSF6BO95407 300 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 HLA-DRB4P13762 266 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 EGR1P18146 543 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 AZU1P20160 251 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 Q9UFV3 132 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 HLA-DRB4X5D2U9 266 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 SELLP14151 372 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 C18orf32Q8TCD1 76 aa11.93□□□□□ -0.5
SEC16A-202ENST00000290037 C5orf63A6NC05 138 aa11.92□□□□□ -0.5
SEC16A-202ENST00000290037 A0A1W2PPI3 338 aa11.92□□□□□ -0.5
SEC16A-202ENST00000290037 SCRT1Q9BWW7 348 aa11.92□□□□□ -0.5
SEC16A-202ENST00000290037 CSTL1Q9H114 145 aa11.92□□□□□ -0.5
SEC16A-202ENST00000290037 CST9LQ9H4G1 147 aa11.92□□□□□ -0.5
SEC16A-202ENST00000290037 CDK2AP2O75956 126 aa11.92□□□□□ -0.5
SEC16A-202ENST00000290037 TRBV25-1A0A075B6N4 114 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 LTAP01374 205 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 PLXNB1O43157 2135 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 TRAV40A0A0B4J280 105 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 K7ENP7 123 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 ZNF134P52741 427 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 VWC2LB2RUY7 222 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 CDKN1BP46527 198 aa11.91□□□□□ -0.5
SEC16A-202ENST00000290037 AKIRIN1Q9H9L7 192 aaPredicted RBP11.9□□□□□ -0.5
SEC16A-202ENST00000290037 SMIM20Q8N5G0 67 aa11.9□□□□□ -0.5
SEC16A-202ENST00000290037 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
SEC16A-202ENST00000290037 TNCP24821 2201 aa11.9□□□□□ -0.5
SEC16A-202ENST00000290037 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
SEC16A-202ENST00000290037 TDGF1P3P51864 188 aa11.9□□□□□ -0.5
SEC16A-202ENST00000290037 SOCS3O14543 225 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 HOXD3P31249 432 aaPredicted RBP11.89□□□□□ -0.51
SEC16A-202ENST00000290037 FOXI2Q6ZQN5 318 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 MSMBP08118 114 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 STPG4Q8N801 248 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 TMEM158Q8WZ71 300 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 UBE2WQ96B02 151 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 V9GYV3 84 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 PLAURQ03405 335 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 DSCAMO60469 2012 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 H3BTX0 84 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 Q0VFX4 171 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 RHPN1-AS1Q9BWJ2 59 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 FNDC4Q9H6D8 234 aaPredicted RBP11.89□□□□□ -0.51
SEC16A-202ENST00000290037 TOMM7Q9P0U1 55 aa11.89□□□□□ -0.51
SEC16A-202ENST00000290037 C15orf65H3BRN8 121 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms