RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 ALKAL2Q6UX46 152 aa12.77□□□□□ -0.37
ATG3-201ENST00000283290 HLA-DRB4X5D2U9 266 aa12.77□□□□□ -0.37
ATG3-201ENST00000283290 A0A0J9YX75 114 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
ATG3-201ENST00000283290 TAS2R45P59539 299 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
ATG3-201ENST00000283290 FOXI2Q6ZQN5 318 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 IQCF2Q8IXL9 164 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 RPUSD4Q96CM3 377 aaKnown RBP12.76□□□□□ -0.37
ATG3-201ENST00000283290 SPATA25Q9BR10 227 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 SLC50A1Q9BRV3 221 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 SLC35B3Q9H1N7 401 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 TMPRSS5Q9H3S3 457 aa12.76□□□□□ -0.37
ATG3-201ENST00000283290 A0A1B0GV50 99 aa12.75□□□□□ -0.37
ATG3-201ENST00000283290 MBP02144 154 aa12.75□□□□□ -0.37
ATG3-201ENST00000283290 GIG44P09565 113 aaPredicted RBP12.75□□□□□ -0.37
ATG3-201ENST00000283290 HIST1H1AQ02539 215 aaPredicted RBP12.75□□□□□ -0.37
ATG3-201ENST00000283290 ICAM4Q14773 271 aa12.75□□□□□ -0.37
ATG3-201ENST00000283290 EBLN2Q6P2I7 272 aa12.75□□□□□ -0.37
ATG3-201ENST00000283290 ACTR3CQ9C0K3 210 aaPredicted RBP12.75□□□□□ -0.37
ATG3-201ENST00000283290 CSTL1Q9H114 145 aa12.75□□□□□ -0.37
ATG3-201ENST00000283290 STAG3L2P0CL84 134 aa12.74□□□□□ -0.37
ATG3-201ENST00000283290 STAG3L3P0CL85 134 aa12.74□□□□□ -0.37
ATG3-201ENST00000283290 CNN1P51911 297 aaKnown RBP12.74□□□□□ -0.37
ATG3-201ENST00000283290 APOC4P55056 127 aa12.74□□□□□ -0.37
ATG3-201ENST00000283290 GUK1Q16774 197 aa12.74□□□□□ -0.37
ATG3-201ENST00000283290 SAMD13Q5VXD3 122 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 FAM213BQ8TBF2 198 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 SEC11BP0C7V7 166 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 GCHFRP30047 84 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 ERCC8Q13216 396 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 FAM74A1Q5RGS3 127 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 OR8A1Q8NGG7 326 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 Q9H3A6 140 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
ATG3-201ENST00000283290 IGKV2-40A0A087WW87 121 aaPredicted RBP12.72□□□□□ -0.37
ATG3-201ENST00000283290 IGKV2D-40P01614 121 aaPredicted RBP12.72□□□□□ -0.37
ATG3-201ENST00000283290 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
ATG3-201ENST00000283290 PQLC2Q6ZP29 291 aa12.72□□□□□ -0.37
ATG3-201ENST00000283290 OVOL2Q9BRP0 275 aa12.72□□□□□ -0.37
ATG3-201ENST00000283290 KIR2DL5BA0A0G2JN68 375 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 KIR2DL5BA0A0G2JPC4 375 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 CTXND1A0A1B0GTU2 59 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 M0R2Z0 102 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 PSG9Q00887 426 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 CLLU1Q5K131 121 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 KIR2DL5AQ8N109 375 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 KIR2DL5BQ8NHK3 375 aa12.71□□□□□ -0.37
ATG3-201ENST00000283290 MAP1LC3B2A6NCE7 125 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 ZNF253O75346 499 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 UBE2G2P60604 165 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 PDE6HQ13956 83 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 SPINK13Q1W4C9 94 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 MAP1LC3BQ9GZQ8 125 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 AAMDCQ9H7C9 122 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 DNAH7Q8WXX0 4024 aa12.7□□□□□ -0.38
ATG3-201ENST00000283290 TRAV12-2A0A075B6T6 113 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 J3KRW8 73 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 CXorf1O96002 111 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 RAB14P61106 215 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 GNG5P63218 68 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 KIR3DS1Q14943 382 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 PGPA6NDG6 321 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 SPRY2O43597 315 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 NMBP08949 121 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 NDUFA5Q16718 116 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 WWC2-AS2Q96NR7 200 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 VGLL1Q99990 258 aa12.69□□□□□ -0.38
ATG3-201ENST00000283290 IGHV3OR16-12A0A075B7B8 117 aa12.68□□□□□ -0.38
ATG3-201ENST00000283290 SFT2D1Q8WV19 159 aa12.68□□□□□ -0.38
ATG3-201ENST00000283290 PCNPQ8WW12 178 aaKnown RBP12.68□□□□□ -0.38
ATG3-201ENST00000283290 RNF183Q96D59 192 aa12.68□□□□□ -0.38
ATG3-201ENST00000283290 YTHDF2Q9Y5A9 579 aaKnown RBP12.68□□□□□ -0.38
ATG3-201ENST00000283290 UBE2CO00762 179 aa12.67□□□□□ -0.38
ATG3-201ENST00000283290 DEFB4AO15263 64 aa12.67□□□□□ -0.38
ATG3-201ENST00000283290 DUSP14O95147 198 aaKnown RBP12.67□□□□□ -0.38
ATG3-201ENST00000283290 MORN3Q6PF18 240 aaPredicted RBP12.67□□□□□ -0.38
ATG3-201ENST00000283290 Q6ZWC4 215 aa12.67□□□□□ -0.38
ATG3-201ENST00000283290 CSNK1G2-AS1Q8NCQ2 148 aa12.67□□□□□ -0.38
ATG3-201ENST00000283290 OR10J6PQ8NGY7 276 aa12.67□□□□□ -0.38
ATG3-201ENST00000283290 PRM2P04554 102 aa12.66□□□□□ -0.38
ATG3-201ENST00000283290 CT45A10P0DMU9 189 aa12.66□□□□□ -0.38
ATG3-201ENST00000283290 SULT1A2P50226 295 aa12.66□□□□□ -0.38
ATG3-201ENST00000283290 Q8TAT8 98 aa12.66□□□□□ -0.38
ATG3-201ENST00000283290 SGK494Q96LW2 274 aa12.66□□□□□ -0.38
ATG3-201ENST00000283290 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
ATG3-201ENST00000283290 A8MTW9 85 aa12.65□□□□□ -0.38
ATG3-201ENST00000283290 GGTLC3B5MD39 225 aa12.65□□□□□ -0.38
ATG3-201ENST00000283290 UMAD1C9J7I0 102 aa12.65□□□□□ -0.38
ATG3-201ENST00000283290 NUTF2P61970 127 aaKnown RBP12.65□□□□□ -0.38
ATG3-201ENST00000283290 OR11H2Q8NH07 326 aa12.65□□□□□ -0.38
ATG3-201ENST00000283290 AGPAT4-IT1Q9H0P7 198 aa12.65□□□□□ -0.38
ATG3-201ENST00000283290 OTORQ9NRC9 128 aa12.65□□□□□ -0.38
ATG3-201ENST00000283290 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
ATG3-201ENST00000283290 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
ATG3-201ENST00000283290 SLC25A5P05141 298 aaKnown RBP12.64□□□□□ -0.39
ATG3-201ENST00000283290 RBMY1A1P0DJD3 496 aaKnown RBP12.64□□□□□ -0.39
ATG3-201ENST00000283290 RBMY1CP0DJD4 496 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms