RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 HERV-K104P63124 156 aa13.78□□□□□ -0.2
SRF-201ENST00000265354 SCGB1A1P11684 91 aa13.77□□□□□ -0.2
SRF-201ENST00000265354 E7EUB6 86 aa13.77□□□□□ -0.21
SRF-201ENST00000265354 C3orf56Q8N813 242 aa13.77□□□□□ -0.21
SRF-201ENST00000265354 H3BMG7 143 aa13.77□□□□□ -0.21
SRF-201ENST00000265354 HERVK_113P61574 105 aa13.77□□□□□ -0.21
SRF-201ENST00000265354 C16orf92Q96LL3 132 aa13.77□□□□□ -0.21
SRF-201ENST00000265354 SP9P0CG40 484 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 VKORC1Q9BQB6 163 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 IGF2RP11717 2491 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 TIMM23O14925 209 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 RABAC1Q9UI14 185 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 C9orf118A6NHY6 69 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 IGKV3-20P01619 116 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 NUP210LQ5VU65 1888 aa13.76□□□□□ -0.21
SRF-201ENST00000265354 TMEM167AQ8TBQ9 72 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 ZC2HC1BQ5TFG8 222 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 MS4A6AQ9H2W1 248 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 NDUFA4L2Q9NRX3 87 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 C21orf62Q9NYP8 219 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 LINC00527Q9UJ94 153 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 K7EP34 96 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 FAM74A4Q5TZK3 123 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 PIEZO1Q92508 2521 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 NDUFB8O95169 186 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 RASL11AQ6T310 242 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 GLMPQ8WWB7 406 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 FXYD5Q96DB9 178 aa13.75□□□□□ -0.21
SRF-201ENST00000265354 C8orf49Q96NF6 230 aa13.74□□□□□ -0.21
SRF-201ENST00000265354 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
SRF-201ENST00000265354 K7ERJ3 54 aa13.74□□□□□ -0.21
SRF-201ENST00000265354 CD59P13987 128 aa13.74□□□□□ -0.21
SRF-201ENST00000265354 TMEM75Q8N9X5 138 aa13.74□□□□□ -0.21
SRF-201ENST00000265354 PHLDA3Q9Y5J5 127 aa13.74□□□□□ -0.21
SRF-201ENST00000265354 NCOR2Q9Y618 2525 aa13.74□□□□□ -0.21
SRF-201ENST00000265354 TOMM40O96008 361 aa13.73□□□□□ -0.21
SRF-201ENST00000265354 C1orf229Q6ZS94 237 aaPredicted RBP13.73□□□□□ -0.21
SRF-201ENST00000265354 Q86TA4 180 aa13.73□□□□□ -0.21
SRF-201ENST00000265354 DEFB125Q8N687 156 aa13.73□□□□□ -0.21
SRF-201ENST00000265354 PATE2Q6UY27 113 aa13.73□□□□□ -0.21
SRF-201ENST00000265354 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.72□□□□□ -0.21
SRF-201ENST00000265354 ATP5G2Q06055 141 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 TMPRSS3P57727 454 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 ZNF503Q96F45 646 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 RAB1BQ9H0U4 201 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 A8MWV9 139 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 TAX1BP3O14907 124 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 CCDC168Q8NDH2 2452 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 PCP2Q8IVA1 136 aa13.72□□□□□ -0.21
SRF-201ENST00000265354 LINC00310P59036 64 aa13.71□□□□□ -0.21
SRF-201ENST00000265354 TMEM170BQ5T4T1 132 aa13.71□□□□□ -0.21
SRF-201ENST00000265354 GDF5OSQ5U4N7 250 aa13.71□□□□□ -0.21
SRF-201ENST00000265354 IGHV1-8P0DP01 117 aa13.71□□□□□ -0.22
SRF-201ENST00000265354 KLRD1Q13241 179 aa13.71□□□□□ -0.22
SRF-201ENST00000265354 TMEM155Q4W5P6 130 aa13.71□□□□□ -0.22
SRF-201ENST00000265354 DPM3Q9P2X0 92 aa13.71□□□□□ -0.22
SRF-201ENST00000265354 SIGLEC9Q9Y336 463 aa13.71□□□□□ -0.22
SRF-201ENST00000265354 GAGE5Q13069 117 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 GAGE6Q13070 117 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 CLEC19AQ6UXS0 136 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 SCGB3A1Q96QR1 104 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 MSMPQ1L6U9 139 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 FABP5P3A8MUU1 101 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 H3BRM9 83 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 P0C879 139 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 FRYQ5TBA9 3013 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 RITA1Q96K30 269 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 OTOGLQ3ZCN5 2332 aa13.7□□□□□ -0.22
SRF-201ENST00000265354 A0A1W2PPM0 123 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 SH2D1AO60880 128 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 DLX6P56179 175 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 GTSF1Q8WW33 167 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 DKK2Q9UBU2 259 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 FRYLO94915 3013 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 ARHGAP32A7KAX9 2087 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 FAM120AOSQ5T036 256 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 OR9G4Q8NGQ1 327 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
SRF-201ENST00000265354 IGHV4-39P01824 125 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 LINC00322Q6ZN03 302 aaPredicted RBP13.69□□□□□ -0.22
SRF-201ENST00000265354 FAM167A-AS1Q96KT0 104 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 TRGV9Q99603 122 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 RHOGP84095 191 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 ERCC8Q13216 396 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 TMEM158Q8WZ71 300 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 TLN2Q9Y4G6 2542 aa13.69□□□□□ -0.22
SRF-201ENST00000265354 HOXA3O43365 443 aaPredicted RBP13.68□□□□□ -0.22
SRF-201ENST00000265354 SPRY2O43597 315 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 C1RLQ9NZP8 487 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 TRAV40A0A0B4J280 105 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 IGHV1-3A0A0C4DH29 117 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 TMEM262E9PQX1 116 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 FAM231DQ6ZW35 169 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 SPAG8Q99932 426 aaPredicted RBP13.68□□□□□ -0.22
SRF-201ENST00000265354 TECTAO75443 2155 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
SRF-201ENST00000265354 IGKCP01834 107 aa13.68□□□□□ -0.22
SRF-201ENST00000265354 CCL21O00585 134 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms