RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 SMIM27A0A1W2PRY6 76 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SDHAF1A6NFY7 115 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 THAP8Q8NA92 274 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 DEPPQ9NTK1 212 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 KIAA1551Q9HCM1 1747 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-49A0A0A0MS15 119 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SHISA3A0PJX4 238 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 WFDC1Q9HC57 220 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-64A0A075B6Q5 118 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 A0A1W2PR77 199 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SAP25Q8TEE9 199 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 MRPL53Q96EL3 112 aaKnown RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 PRR15LQ9BU68 103 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SONP18583 2426 aaKnown RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 TAF1P21675 1872 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 UBE2AP49459 152 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 TIAF1O95411 115 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 MUSTN1Q8IVN3 82 aa4.45□□□□□ -1.7
XRN1-201ENST00000264951 SP7Q8TDD2 431 aaPredicted RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 PDCD11Q14690 1871 aaKnown RBP4.45□□□□□ -1.7
XRN1-201ENST00000264951 RGPD4Q7Z3J3 1758 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 DOCK3Q8IZD9 2030 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 SVIPQ8NHG7 77 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 THBDP07204 575 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 CD33P20138 364 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 PRDM6Q9NQX0 595 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 USF3Q68DE3 2245 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 RBAKDNA6NC62 111 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 MYOFQ9NZM1 2061 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 SLC25A29Q8N8R3 303 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 WFDC9Q8NEX5 89 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 KMT2EQ8IZD2 1858 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 E9PLN8 166 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 IGHV1-8P0DP01 117 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 C12orf74Q32Q52 190 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 STPG1Q5TH74 334 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 ZNF474Q6S9Z5 364 aaPredicted RBP4.44□□□□□ -1.7
XRN1-201ENST00000264951 NAA38Q9BRA0 125 aaKnown RBP4.44□□□□□ -1.7
XRN1-201ENST00000264951 SPG11Q96JI7 2443 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 B4DSR2 109 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 ARMS2P0C7Q2 107 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 FOXF2Q12947 444 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 MORN5Q5VZ52 161 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 FOXI2Q6ZQN5 318 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 LINC00643Q86TS7 51 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 UQCRQO14949 82 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 C20orf173Q96LM9 149 aa4.44□□□□□ -1.7
XRN1-201ENST00000264951 MCRIP2Q9BUT9 160 aaKnown RBP4.44□□□□□ -1.7
XRN1-201ENST00000264951 PROP1O75360 226 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 VSIRQ9H7M9 311 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 FAM208BQ5VWN6 2430 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGKV2-40A0A087WW87 121 aaPredicted RBP4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGKV2D-40P01614 121 aaPredicted RBP4.43□□□□□ -1.7
XRN1-201ENST00000264951 CFHR2P36980 270 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 C1orf122Q6ZSJ8 110 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 EXOC3-AS1Q8N2X6 119 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 CFHR4Q92496 578 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 NTN5Q8WTR8 489 aaPredicted RBP4.43□□□□□ -1.7
XRN1-201ENST00000264951 ITGB4P16144 1822 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 EFNA4P52798 201 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 PAX9P55771 341 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGHV1-3A0A0C4DH29 117 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-66A0A0C4DH42 116 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGKV1-9A0A0C4DH69 117 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 H0YJW9 148 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 H3BUA1 57 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 NREPQ16612 68 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 C3orf36Q3SXR2 165 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 VMO1Q7Z5L0 202 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 PAQR4Q8N4S7 273 aaPredicted RBP4.43□□□□□ -1.7
XRN1-201ENST00000264951 PLA2G2FQ9BZM2 168 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 E9PQ18 207 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGLV3-19P01714 112 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGHV3-11P01762 117 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 CD55P08174 381 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 APOC4P55056 127 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 SCRT1Q9BWW7 348 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 EML6Q6ZMW3 1958 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGKV1-5P01602 117 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGLL1P15814 213 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 C8orf31Q8N9H6 132 aa4.43□□□□□ -1.7
XRN1-201ENST00000264951 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 C10orf105Q8TEF2 133 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 BTAF1O14981 1849 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 TRBV19A0A075B6N1 114 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 TRAV25A0A0B4J276 109 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 NPSP0C0P6 89 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 CFHR1Q03591 330 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 MALRD1Q5VYJ5 2156 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 CDCP2Q5VXM1 449 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 RHPN1-AS1Q9BWJ2 59 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 PRR19A6NJB7 356 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 K7EM74 188 aa4.42□□□□□ -1.7
XRN1-201ENST00000264951 RNASE2P10153 161 aaKnown RBP4.42□□□□□ -1.7
XRN1-201ENST00000264951 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
XRN1-201ENST00000264951 IMUPQ9GZP8 106 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms