RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 SULT1A2P50226 295 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 RANP62826 216 aaKnown RBP9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 HIST1H1AQ02539 215 aaPredicted RBP9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 GCSAMLQ5JQS6 135 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 TMEM78Q5T7P6 136 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 TMED6Q8WW62 240 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 RAB24Q969Q5 203 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 SAT2Q96F10 170 aaPredicted RBP9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 CLUHP3Q96NS8 147 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 TMEM208Q9BTX3 173 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 SLC25A2Q9BXI2 301 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 GOLT1BQ9Y3E0 138 aa9.3□□□□□ -0.92
CLNS1A-201ENST00000263309 F6UZH7 168 aa9.29□□□□□ -0.92
CLNS1A-201ENST00000263309 H3BMM0 161 aa9.29□□□□□ -0.92
CLNS1A-201ENST00000263309 OR10J4P0C629 311 aa9.29□□□□□ -0.92
CLNS1A-201ENST00000263309 BLOC1S1P78537 153 aa9.29□□□□□ -0.92
CLNS1A-201ENST00000263309 LINC00477Q96M19 166 aa9.29□□□□□ -0.92
CLNS1A-201ENST00000263309 WFDC10AQ9H1F0 79 aa9.29□□□□□ -0.92
CLNS1A-201ENST00000263309 A0A0J9YX75 114 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 H3BQ15 152 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 SOCS3O14543 225 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 IGKV3-20P01619 116 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 PYYP10082 97 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 LEPP41159 167 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 ICAM4Q14773 271 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 LINC00322Q6ZN03 302 aaPredicted RBP9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 TRPT1Q86TN4 253 aaKnown RBP9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 FAM24BQ8N5W8 94 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 OR8A1Q8NGG7 326 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 RARRES2Q99969 163 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 SH3BGRL3Q9H299 93 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 ZNF586Q9NXT0 402 aa9.28□□□□□ -0.92
CLNS1A-201ENST00000263309 SERTM2A0A1B0GWG4 89 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 PGPA6NDG6 321 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 HBE1P02100 147 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 SNRPCP09234 159 aaKnown RBP9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 H2AFB1P0C5Y9 115 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 STAG3L2P0CL84 134 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 STAG3L3P0CL85 134 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 RNF182Q8N6D2 247 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 FAM213BQ8TBF2 198 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 TM2D3Q9BRN9 247 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 NDFIP1Q9BT67 221 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 OTORQ9NRC9 128 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 RFNGQ9Y644 331 aa9.27□□□□□ -0.93
CLNS1A-201ENST00000263309 RYR3Q15413 4870 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 FBLL1A6NHQ2 334 aaKnown RBP9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 ZNF705EA8MWA4 302 aaPredicted RBP9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 H3BTX0 84 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 ATP6V1G1O75348 118 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 ARL14EPLP0DKL9 152 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 ZNF124Q15973 351 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 MORN5Q5VZ52 161 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 IGFL4Q6B9Z1 124 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 SLC7A5P1Q8MH63 180 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 RPP25LQ8N5L8 163 aaKnown RBP9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 SFT2D1Q8WV19 159 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 RNF183Q96D59 192 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 FXYD5Q96DB9 178 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 CITED4Q96RK1 184 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 Q9H3A6 140 aa9.26□□□□□ -0.93
CLNS1A-201ENST00000263309 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 MAP1LC3B2A6NCE7 125 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 SMIM9A6NGZ8 99 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 HMGB3O15347 200 aaKnown RBP9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 INSP01308 110 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 IFNA1P01562 189 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 SLC25A5P05141 298 aaKnown RBP9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 S100A1P23297 94 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 GCHFRP30047 84 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 DEFB135Q30KP9 77 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 CCDC28AQ8IWP9 274 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 MAP1LC3BQ9GZQ8 125 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 PLA2G2EQ9NZK7 142 aa9.25□□□□□ -0.93
CLNS1A-201ENST00000263309 NOTCH3Q9UM47 2321 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 A0A1W2PRE2 83 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 MIFP14174 115 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 CDKN1BP46527 198 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 COMMD7Q86VX2 200 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 EIF4E3Q8N5X7 224 aaKnown RBP9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 OR11H2Q8NH07 326 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 LYPD6BQ8NI32 183 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 C20orf144Q9BQM9 153 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 TCEAL7Q9BRU2 100 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 NIPSNAP3BQ9BS92 247 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 XCL2Q9UBD3 114 aa9.24□□□□□ -0.93
CLNS1A-201ENST00000263309 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 F6UB75 175 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 GPX1P07203 203 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 SUMO1P63165 101 aaKnown RBP9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
CLNS1A-201ENST00000263309 PCNPQ8WW12 178 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms