RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 CHEK1O14757 476 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 IGKV2D-40P01614 121 aaPredicted RBP18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 SMIM6P0DI80 62 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 WDR73Q6P4I2 378 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 GBGT1Q8N5D6 347 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 ARL6IP6Q8N6S5 226 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 OR4X2Q8NGF9 303 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 SERTM2A0A1B0GWG4 89 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 UNQ9165/PRO28630Q6UXU0 137 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 VPREB3Q9UKI3 123 aa18.45■□□□□ 0.54
TSPAN13-201ENST00000262067 DOPEY2Q9Y3R5 2298 aa18.44■□□□□ 0.54
TSPAN13-201ENST00000262067 ZNF705FA8MVS1 300 aaPredicted RBP18.44■□□□□ 0.54
TSPAN13-201ENST00000262067 NPIPB6E9PJ23 425 aa18.44■□□□□ 0.54
TSPAN13-201ENST00000262067 FABP4P15090 132 aa18.44■□□□□ 0.54
TSPAN13-201ENST00000262067 CT83Q5H943 113 aa18.44■□□□□ 0.54
TSPAN13-201ENST00000262067 TCF24Q7RTU0 167 aa18.44■□□□□ 0.54
TSPAN13-201ENST00000262067 A0A0G2JLM5 398 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 A8MWL6 223 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 RAB4BP61018 213 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 COX19Q49B96 90 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 WFDC11Q8NEX6 87 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 OR10D4PQ8NGN7 298 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 C8orf49Q96NF6 230 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 NDUFA4O00483 81 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 MT-ND6P03923 174 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 LCN12Q6JVE5 192 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 GTSF1Q8WW33 167 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 HIST1H2BLQ99880 126 aa18.43■□□□□ 0.54
TSPAN13-201ENST00000262067 PRRC2AP48634 2157 aaKnown RBP18.42■□□□□ 0.54
TSPAN13-201ENST00000262067 A0A1B0GUS0 222 aa18.42■□□□□ 0.54
TSPAN13-201ENST00000262067 GRIFINA4D1Z8 144 aa18.42■□□□□ 0.54
TSPAN13-201ENST00000262067 CRIP1P50238 77 aa18.42■□□□□ 0.54
TSPAN13-201ENST00000262067 C16orf54Q6UWD8 224 aa18.41■□□□□ 0.54
TSPAN13-201ENST00000262067 RNF182Q8N6D2 247 aa18.41■□□□□ 0.54
TSPAN13-201ENST00000262067 VGLL1Q99990 258 aa18.41■□□□□ 0.54
TSPAN13-201ENST00000262067 HOXA3O43365 443 aaPredicted RBP18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 C10orf99Q6UWK7 81 aa18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 OR4B1Q8NGF8 309 aa18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 OR2D3Q8NGH3 330 aa18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 WIPF2Q8TF74 440 aaPredicted RBP18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 NBPF19A0A087WUL8 3843 aa18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 PSMB8P28062 276 aa18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 SLC50A1Q9BRV3 221 aa18.4■□□□□ 0.54
TSPAN13-201ENST00000262067 HLA-DQA1P01909 254 aa18.39■□□□□ 0.53
TSPAN13-201ENST00000262067 GDF5OSQ5U4N7 250 aa18.39■□□□□ 0.53
TSPAN13-201ENST00000262067 RASL11AQ6T310 242 aa18.39■□□□□ 0.53
TSPAN13-201ENST00000262067 PRAC2D3DTV9 90 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 SMAD7O15105 426 aaKnown RBP18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 AMBPP02760 352 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 GZMBP10144 247 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 KIAA1644Q3SXP7 199 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 TMEM256Q8N2U0 113 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 GLMPQ8WWB7 406 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 GFRA4Q9GZZ7 299 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 PRDM13Q9H4Q3 707 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 TRAV8-2A0A0B4J237 113 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 CRISP2P16562 243 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 PGLYRP4Q96LB8 373 aa18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 PACRGQ96M98 296 aaPredicted RBP18.38■□□□□ 0.53
TSPAN13-201ENST00000262067 C8orf86Q6ZUL3 223 aa18.37■□□□□ 0.53
TSPAN13-201ENST00000262067 Q8TAT8 98 aa18.37■□□□□ 0.53
TSPAN13-201ENST00000262067 PRR25Q96S07 402 aa18.37■□□□□ 0.53
TSPAN13-201ENST00000262067 PYY3Q5JQD4 70 aa18.37■□□□□ 0.53
TSPAN13-201ENST00000262067 NPFFR1Q9GZQ6 430 aa18.37■□□□□ 0.53
TSPAN13-201ENST00000262067 TP53TG3Q9ULZ0 132 aa18.37■□□□□ 0.53
TSPAN13-201ENST00000262067 TEX15Q9BXT5 2789 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 CREBBPQ92793 2442 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 A0A1B0GXF2 115 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 FAM231BA6NCW3 169 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 FBLL1A6NHQ2 334 aaKnown RBP18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 NUPR1O60356 82 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 CT45A10P0DMU9 189 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 FAM209BQ5JX69 171 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 SAPCD1Q5SSQ6 148 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 ATP5L2Q7Z4Y8 100 aa18.36■□□□□ 0.53
TSPAN13-201ENST00000262067 APCSP02743 223 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 CAMPP49913 170 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 RBPMS2Q6ZRY4 209 aaKnown RBP18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 ZNF702PQ9H963 129 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 PEF1Q9UBV8 284 aaKnown RBP18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 PCP4L1A6NKN8 68 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 ERCC8Q13216 396 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 SLAQ13239 276 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 COX8CQ7Z4L0 72 aa18.35■□□□□ 0.53
TSPAN13-201ENST00000262067 IL17RELQ6ZVW7 336 aa18.34■□□□□ 0.53
TSPAN13-201ENST00000262067 NIT2Q9NQR4 276 aa18.34■□□□□ 0.53
TSPAN13-201ENST00000262067 TMEM89A2RUT3 159 aa18.34■□□□□ 0.53
TSPAN13-201ENST00000262067 MXRA5Q9NR99 2828 aa18.33■□□□□ 0.53
TSPAN13-201ENST00000262067 F2Z2F3 143 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 FOXA3P55318 350 aaPredicted RBP18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 Q0VG73 95 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 DUX5Q96PT3 197 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 SSBP4Q9BWG4 385 aaPredicted RBP18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 SH2D1AO60880 128 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 RPLP1P05386 114 aaKnown RBP18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 LINC00310P59036 64 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 HBBP68871 147 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 TM4SF20Q53R12 229 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 SIGLECL1Q8N7X8 197 aa18.32■□□□□ 0.52
TSPAN13-201ENST00000262067 RBAKDNA6NC62 111 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms