RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 LTAP01374 205 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 CSN1S1P47710 185 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 SLC25A39Q9BZJ4 359 aaPredicted RBP17.78■□□□□ 0.44
MCF2L-201ENST00000261963 NBR2O15453 112 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 TCRAP04437 139 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 SMIM17P0DL12 118 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 HSD52Q0P140 79 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 RASL11BQ9BPW5 248 aa17.78■□□□□ 0.44
MCF2L-201ENST00000261963 ODF3BA8MYP8 253 aa17.77■□□□□ 0.44
MCF2L-201ENST00000261963 NPFFR1Q9GZQ6 430 aa17.77■□□□□ 0.44
MCF2L-201ENST00000261963 SPCS1Q9Y6A9 102 aa17.77■□□□□ 0.43
MCF2L-201ENST00000261963 NDUFA3O95167 84 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 NPBQ8NG41 125 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 TMEM14CQ9P0S9 112 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 M0R1W7 72 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 FA2HQ7L5A8 372 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 BOD1L2Q8IYS8 172 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 RAB37Q96AX2 223 aa17.76■□□□□ 0.43
MCF2L-201ENST00000261963 A0A1W2PPM0 123 aa17.75■□□□□ 0.43
MCF2L-201ENST00000261963 A1L4Q6 167 aa17.75■□□□□ 0.43
MCF2L-201ENST00000261963 PRTN3P24158 256 aa17.75■□□□□ 0.43
MCF2L-201ENST00000261963 CEACAM3P40198 252 aa17.75■□□□□ 0.43
MCF2L-201ENST00000261963 OR9G4Q8NGQ1 327 aa17.75■□□□□ 0.43
MCF2L-201ENST00000261963 SPTBN4Q9H254 2564 aa17.75■□□□□ 0.43
MCF2L-201ENST00000261963 A0A1W2PRD5 423 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 A0A1W2PRF3 423 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 A0A1W2PRM7 423 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 NDUFS8O00217 210 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 PRSS3P2Q8NHM4 247 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 COL6A6A6NMZ7 2263 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 COL8A1P27658 744 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 OTORQ9NRC9 128 aa17.74■□□□□ 0.43
MCF2L-201ENST00000261963 NPIPB6E9PJ23 425 aa17.73■□□□□ 0.43
MCF2L-201ENST00000261963 SMAD7O15105 426 aaKnown RBP17.73■□□□□ 0.43
MCF2L-201ENST00000261963 GNG7O60262 68 aa17.73■□□□□ 0.43
MCF2L-201ENST00000261963 SIVA1O15304 175 aa17.73■□□□□ 0.43
MCF2L-201ENST00000261963 SPTBN1Q01082 2364 aaKnown RBP17.73■□□□□ 0.43
MCF2L-201ENST00000261963 KLF17Q5JT82 389 aaPredicted RBP17.72■□□□□ 0.43
MCF2L-201ENST00000261963 OR4X2Q8NGF9 303 aa17.72■□□□□ 0.43
MCF2L-201ENST00000261963 THYN1Q9P016 225 aa17.72■□□□□ 0.43
MCF2L-201ENST00000261963 C5orf64Q2M2E5 130 aa17.72■□□□□ 0.43
MCF2L-201ENST00000261963 EXOC3-AS1Q8N2X6 119 aa17.72■□□□□ 0.43
MCF2L-201ENST00000261963 OR8A1Q8NGG7 326 aa17.72■□□□□ 0.43
MCF2L-201ENST00000261963 SVIPQ8NHG7 77 aa17.72■□□□□ 0.43
MCF2L-201ENST00000261963 CSMD1Q96PZ7 3565 aa17.71■□□□□ 0.43
MCF2L-201ENST00000261963 TRAV8-1A0A0A6YYK1 113 aa17.71■□□□□ 0.43
MCF2L-201ENST00000261963 SHANK2-AS3Q9BTD1 123 aa17.71■□□□□ 0.43
MCF2L-201ENST00000261963 FABP2P12104 132 aa17.71■□□□□ 0.43
MCF2L-201ENST00000261963 ADAMTSL5Q6ZMM2 481 aa17.71■□□□□ 0.43
MCF2L-201ENST00000261963 Q71RC1 249 aaPredicted RBP17.71■□□□□ 0.43
MCF2L-201ENST00000261963 DYNAPQ8N1N2 210 aa17.71■□□□□ 0.43
MCF2L-201ENST00000261963 A0A1B0GUT8 65 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 A0A1W2PPR1 153 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 IGLV2-11P01706 119 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 SCGB1A1P11684 91 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 HES1Q14469 280 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 Q86TA4 180 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 H3BRN7 92 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 HOXB4P17483 251 aaPredicted RBP17.7■□□□□ 0.42
MCF2L-201ENST00000261963 ZNF491Q8N8L2 437 aa17.7■□□□□ 0.42
MCF2L-201ENST00000261963 GOSR1O95249 250 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 RPL24P83731 157 aaKnown RBP17.69■□□□□ 0.42
MCF2L-201ENST00000261963 RIGQ13278 110 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 LGALS9BQ3B8N2 356 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 LGALS9CQ6DKI2 356 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 DTX2Q86UW9 622 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 PIP4P2Q8N4L2 257 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 C17orf77Q96MU5 243 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 S4R3C0 116 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 FANCD2OSQ96PS1 177 aa17.69■□□□□ 0.42
MCF2L-201ENST00000261963 NDPQ00604 133 aa17.68■□□□□ 0.42
MCF2L-201ENST00000261963 GOLT1AQ6ZVE7 132 aa17.68■□□□□ 0.42
MCF2L-201ENST00000261963 CIARTQ8N365 385 aaPredicted RBP17.68■□□□□ 0.42
MCF2L-201ENST00000261963 CHD8Q9HCK8 2581 aa17.68■□□□□ 0.42
MCF2L-201ENST00000261963 TRBV19A0A075B6N1 114 aa17.68■□□□□ 0.42
MCF2L-201ENST00000261963 ZFP36P26651 326 aaKnown RBP17.68■□□□□ 0.42
MCF2L-201ENST00000261963 VMO1Q7Z5L0 202 aa17.68■□□□□ 0.42
MCF2L-201ENST00000261963 RNF125Q96EQ8 232 aa17.68■□□□□ 0.42
MCF2L-201ENST00000261963 ASH1LQ9NR48 2969 aaKnown RBP17.68■□□□□ 0.42
MCF2L-201ENST00000261963 MED13LQ71F56 2210 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 AZU1P20160 251 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 TCTAP57738 103 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 HIVEP3Q5T1R4 2406 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 IGLV11-55A0A075B6I3 123 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 OVOL3O00110 214 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 MRPS12O15235 138 aaKnown RBP17.67■□□□□ 0.42
MCF2L-201ENST00000261963 IL4P05112 153 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 ARMS2P0C7Q2 107 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 SAMD5Q5TGI4 173 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 C1orf122Q6ZSJ8 110 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 BCL6BQ8N143 479 aaPredicted RBP17.67■□□□□ 0.42
MCF2L-201ENST00000261963 NCOR2Q9Y618 2525 aa17.67■□□□□ 0.42
MCF2L-201ENST00000261963 BMI1P35226 326 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 ZNF562Q6V9R5 426 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 Q8N6K4 173 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 SIGMAR1Q99720 223 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 SVEP1Q4LDE5 3571 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 A0A096LNJ9 63 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 WI2-2373I1.2A0A1W2PRP0 233 aa17.66■□□□□ 0.42
MCF2L-201ENST00000261963 ZNF785A8K8V0 405 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms