RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 IGHV4-31P0DP07 118 aa14.98□□□□□ -0.01
COL4A3BP-201ENST00000261415 RTL8BQ17RB0 113 aa14.98□□□□□ -0.01
COL4A3BP-201ENST00000261415 MIC13Q5XKP0 118 aa14.98□□□□□ -0.01
COL4A3BP-201ENST00000261415 FAM231DQ6ZW35 169 aa14.98□□□□□ -0.01
COL4A3BP-201ENST00000261415 OR4X2Q8NGF9 303 aa14.98□□□□□ -0.01
COL4A3BP-201ENST00000261415 IGHV1-3A0A0C4DH29 117 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 IGLV2-8P01709 118 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 SAMD5Q5TGI4 173 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 GDF5OSQ5U4N7 250 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 MGST2Q99735 147 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 RABAC1Q9UI14 185 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 CENPVL3A0A0U1RRI6 287 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 A0A1W2PRE2 83 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 RBMXL2O75526 392 aaKnown RBP14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 TGFAP01135 160 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 IGKV1-16P04430 117 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 ADAMTSL5Q6ZMM2 481 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 LINC00173Q6ZV60 143 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 NUP35Q8NFH5 326 aa14.97□□□□□ -0.01
COL4A3BP-201ENST00000261415 A0A1W2PPI3 338 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 MINOS1Q5TGZ0 78 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 H2BFWTQ7Z2G1 175 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 NAA38Q9BRA0 125 aaKnown RBP14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 HILPDAQ9Y5L2 63 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 MINOS1-NBL1R4GNA1 71 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 MYO9AB2RTY4 2548 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 TRAV40A0A0B4J280 105 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 SH2D7A6NKC9 451 aaPredicted RBP14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 VGLL1Q99990 258 aa14.96□□□□□ -0.01
COL4A3BP-201ENST00000261415 MOB3BQ86TA1 216 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 PDPNQ86YL7 162 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 RAB37Q96AX2 223 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 IGF2BP2-AS1Q96M15 143 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 SIGLEC8Q9NYZ4 499 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 CSPG4Q6UVK1 2322 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 TNCP24821 2201 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 IGHV3-72A0A0B4J1Y9 119 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 FGF6P10767 208 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 SAA4P35542 130 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 CIARTQ8N365 385 aaPredicted RBP14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 TEX45Q8NA69 505 aa14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 SPANXB1Q9NS25 103 aaPredicted RBP14.95□□□□□ -0.02
COL4A3BP-201ENST00000261415 NPFFO15130 113 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 CRYGCP07315 174 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 VKORC1L1Q8N0U8 176 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 ZNF418Q8TF45 676 aaPredicted RBP14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 IGHV1-69DA0A0B4J2H0 117 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 SNAI2O43623 268 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 CA1P00915 261 aaPredicted RBP14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 AVPP01185 164 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 IGHV1-69P01742 117 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 SMIM13P0DJ93 91 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 ERVK-16P61578 105 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 BOD1L2Q8IYS8 172 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 DYNAPQ8N1N2 210 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 PIP4P2Q8N4L2 257 aa14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 OSR1Q8TAX0 266 aaPredicted RBP14.94□□□□□ -0.02
COL4A3BP-201ENST00000261415 IGHV3OR16-10A0A075B7F0 116 aa14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 J3QLI3 93 aa14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 TIMM23O14925 209 aa14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 TMEM177Q53S58 311 aa14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 OR4C13Q8NGP0 309 aa14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 FLYWCH2Q96CP2 140 aaKnown RBP14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 AJUBAQ96IF1 538 aa14.93□□□□□ -0.02
COL4A3BP-201ENST00000261415 A0A1B0GXF2 115 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 OOSP1A8MZH6 123 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 SLC25A17O43808 307 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 IGHV4-38-2P0DP08 117 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 RUSC1-AS1Q66K80 236 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 HARBI1Q96MB7 349 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 ZFHX3Q15911 3703 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 CAMPP49913 170 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 PSG5Q15238 335 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 CFHR4Q92496 578 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 TMEM140Q9NV12 185 aa14.92□□□□□ -0.02
COL4A3BP-201ENST00000261415 SRRM4A7MD48 611 aaKnown RBP14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 FOXE3Q13461 319 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 POU2AF1Q16633 256 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 SPATA31B1PQ5VZV4 182 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 BRD3OSQ6XYD6 125 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 OR52E5Q8NH55 327 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 ZNF355PQ9NSJ1 428 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 LSM4Q9Y4Z0 139 aaKnown RBP14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 SOX21Q9Y651 276 aaPredicted RBP14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 NOTCH2Q04721 2471 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 SMAD7O15105 426 aaKnown RBP14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 HBBP68871 147 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 PLXNB1O43157 2135 aa14.91□□□□□ -0.02
COL4A3BP-201ENST00000261415 KLF17Q5JT82 389 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-201ENST00000261415 STPG3Q8N7X2 389 aa14.9□□□□□ -0.02
COL4A3BP-201ENST00000261415 TLN2Q9Y4G6 2542 aa14.9□□□□□ -0.02
COL4A3BP-201ENST00000261415 SSMEM1Q8WWF3 244 aa14.9□□□□□ -0.02
COL4A3BP-201ENST00000261415 SPAG8Q99932 426 aaPredicted RBP14.9□□□□□ -0.02
COL4A3BP-201ENST00000261415 PLEKHA3Q9HB20 300 aa14.9□□□□□ -0.02
COL4A3BP-201ENST00000261415 BAHCC1Q9P281 2608 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 TEX50A0A1B0GTY4 177 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 HIGD1CA8MV81 97 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 SPINK9Q5DT21 86 aa14.89□□□□□ -0.03
COL4A3BP-201ENST00000261415 TEPPQ6URK8 271 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms