RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 RABAC1Q9UI14 185 aa14.55□□□□□ -0.08
LRP3-201ENST00000253193 IFI27P40305 119 aaPredicted RBP14.54□□□□□ -0.08
LRP3-201ENST00000253193 SPTBN4Q9H254 2564 aa14.54□□□□□ -0.08
LRP3-201ENST00000253193 H3BRN7 92 aa14.54□□□□□ -0.08
LRP3-201ENST00000253193 UQCRFS1P47985 274 aa14.54□□□□□ -0.08
LRP3-201ENST00000253193 RNF5Q99942 180 aa14.54□□□□□ -0.08
LRP3-201ENST00000253193 SMKR1H3BMG3 65 aa14.54□□□□□ -0.08
LRP3-201ENST00000253193 SIGLEC15Q6ZMC9 328 aa14.54□□□□□ -0.08
LRP3-201ENST00000253193 NCR2O95944 276 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 FAM120AOSQ5T036 256 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 ZNF414Q96IQ9 312 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 C18orf15Q96N68 181 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 UBTD1Q9HAC8 227 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 A0A087X0K7 114 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 HAX1O00165 279 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 LDLRAD2Q5SZI1 272 aa14.53□□□□□ -0.08
LRP3-201ENST00000253193 PSG9Q00887 426 aa14.52□□□□□ -0.08
LRP3-201ENST00000253193 VMO1Q7Z5L0 202 aa14.52□□□□□ -0.08
LRP3-201ENST00000253193 ST20Q9HBF5 79 aa14.52□□□□□ -0.08
LRP3-201ENST00000253193 K7ENP7 123 aa14.52□□□□□ -0.09
LRP3-201ENST00000253193 SH2D1AO60880 128 aa14.52□□□□□ -0.09
LRP3-201ENST00000253193 FAM231BA6NCW3 169 aa14.52□□□□□ -0.09
LRP3-201ENST00000253193 HLA-DMBP28068 263 aa14.52□□□□□ -0.09
LRP3-201ENST00000253193 TMEM75Q8N9X5 138 aa14.51□□□□□ -0.09
LRP3-201ENST00000253193 IGHV3OR16-10A0A075B7F0 116 aa14.51□□□□□ -0.09
LRP3-201ENST00000253193 RPL11P62913 178 aaKnown RBP14.51□□□□□ -0.09
LRP3-201ENST00000253193 PET117Q6UWS5 81 aa14.51□□□□□ -0.09
LRP3-201ENST00000253193 ORMDL3Q8N138 153 aa14.51□□□□□ -0.09
LRP3-201ENST00000253193 RAXQ9Y2V3 346 aa14.51□□□□□ -0.09
LRP3-201ENST00000253193 LRBAP50851 2863 aa14.51□□□□□ -0.09
LRP3-201ENST00000253193 NDUFS7O75251 213 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 NMUP48645 174 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 SAPCD1Q5SSQ6 148 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 FAM106CPP0CH98 169 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 IGLV2-11P01706 119 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 ZNF562Q6V9R5 426 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 C12orf54Q6X4T0 127 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 FER1L6-AS1Q8NA97 138 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 C1RLQ9NZP8 487 aa14.5□□□□□ -0.09
LRP3-201ENST00000253193 CLEC3BP05452 202 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 PRTN3P24158 256 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 UFC1Q9Y3C8 167 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 BMI1P35226 326 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 IGKV3-7A0A075B6H7 116 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 PRSS1P07477 247 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 LYPD1Q8N2G4 141 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 HIF1ANQ9NWT6 349 aa14.49□□□□□ -0.09
LRP3-201ENST00000253193 C15orf32Q32M92 178 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 Q6AWC8 147 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 CLEC19AQ6UXS0 136 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 S100A7P31151 101 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 CACNG7P62955 275 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 LINC00527Q9UJ94 153 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 IGHV2-70DA0A0C4DH43 119 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 GOSR1O95249 250 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 NDPQ00604 133 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 ERCC8Q13216 396 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 VGLL1Q99990 258 aa14.48□□□□□ -0.09
LRP3-201ENST00000253193 TAX1BP3O14907 124 aa14.47□□□□□ -0.09
LRP3-201ENST00000253193 FAM106AQ4KMX7 169 aa14.47□□□□□ -0.09
LRP3-201ENST00000253193 AMMECR1LQ6DCA0 310 aa14.47□□□□□ -0.09
LRP3-201ENST00000253193 SMIM15Q7Z3B0 74 aa14.47□□□□□ -0.09
LRP3-201ENST00000253193 CRIP1P50238 77 aa14.47□□□□□ -0.09
LRP3-201ENST00000253193 NEU4Q8WWR8 484 aaPredicted RBP14.47□□□□□ -0.09
LRP3-201ENST00000253193 EVI2AP22794 236 aa14.46□□□□□ -0.09
LRP3-201ENST00000253193 RHOGP84095 191 aa14.46□□□□□ -0.09
LRP3-201ENST00000253193 RNF182Q8N6D2 247 aa14.46□□□□□ -0.09
LRP3-201ENST00000253193 SRSF8Q9BRL6 282 aaKnown RBP14.46□□□□□ -0.09
LRP3-201ENST00000253193 FANCD2OSQ96PS1 177 aa14.46□□□□□ -0.09
LRP3-201ENST00000253193 A0A1B0GW15 77 aa14.46□□□□□ -0.1
LRP3-201ENST00000253193 SVEP1Q4LDE5 3571 aa14.45□□□□□ -0.1
LRP3-201ENST00000253193 CDSNQ15517 529 aa14.45□□□□□ -0.1
LRP3-201ENST00000253193 BVES-AS1Q5T3Y7 98 aa14.45□□□□□ -0.1
LRP3-201ENST00000253193 SIGLEC8Q9NYZ4 499 aa14.45□□□□□ -0.1
LRP3-201ENST00000253193 LOXL1Q08397 574 aaPredicted RBP14.44□□□□□ -0.1
LRP3-201ENST00000253193 DYNAPQ8N1N2 210 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 OR11H6Q8NGC7 330 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 PRR25Q96S07 402 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 LY6LH3BQJ8 138 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 NPIPB6E9PJ23 425 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 M0R1W7 72 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 EGR2P11161 476 aaPredicted RBP14.44□□□□□ -0.1
LRP3-201ENST00000253193 RAB37Q96AX2 223 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 RELNP78509 3460 aa14.44□□□□□ -0.1
LRP3-201ENST00000253193 PDE6HQ13956 83 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 FAM104BQ5XKR9 115 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 NAA38Q9BRA0 125 aaKnown RBP14.43□□□□□ -0.1
LRP3-201ENST00000253193 ZNF747Q9BV97 191 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 IGLV11-55A0A075B6I3 123 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 G3V318 75 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 KLRB1Q12918 225 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 TM4SF20Q53R12 229 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 MSRB1Q9NZV6 116 aa14.43□□□□□ -0.1
LRP3-201ENST00000253193 FABP5P3A8MUU1 101 aa14.42□□□□□ -0.1
LRP3-201ENST00000253193 K7EP13 123 aa14.42□□□□□ -0.1
LRP3-201ENST00000253193 MRPL51Q4U2R6 128 aaKnown RBP14.42□□□□□ -0.1
LRP3-201ENST00000253193 VPS25Q9BRG1 176 aa14.42□□□□□ -0.1
LRP3-201ENST00000253193 TMEM219Q86XT9 240 aa14.42□□□□□ -0.1
LRP3-201ENST00000253193 MAP1LC3AQ9H492 121 aa14.42□□□□□ -0.1
LRP3-201ENST00000253193 TMEM78Q5T7P6 136 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms