RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 CENPVL3A0A0U1RRI6 287 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 A0A1B0GUT8 65 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 RPL7P18124 248 aaKnown RBP13.5□□□□□ -0.25
LRFN3-201ENST00000246529 CTRLP40313 264 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 ZNF502Q8TBZ5 544 aa13.5□□□□□ -0.25
LRFN3-201ENST00000246529 CSN1S1P47710 185 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 IGHV3OR16-13A0A075B7E8 117 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 IGHV3-74A0A0B4J1X5 117 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 MUC21A0A0G2JKD1 596 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 MUC21A0A140T8X8 626 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 IGHG4P01861 327 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 MUC21Q5SSG8 566 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 LINC00173Q6ZV60 143 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 VGLL1Q99990 258 aa13.49□□□□□ -0.25
LRFN3-201ENST00000246529 C2orf70A6NJV1 201 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 PSG9Q00887 426 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.48□□□□□ -0.25
LRFN3-201ENST00000246529 SH2D1AO60880 128 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 CSN3P07498 182 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 CT45A10P0DMU9 189 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 RELQ04864 619 aaPredicted RBP13.48□□□□□ -0.25
LRFN3-201ENST00000246529 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 LINC00527Q9UJ94 153 aa13.48□□□□□ -0.25
LRFN3-201ENST00000246529 IGHV1-24A0A0C4DH33 117 aa13.47□□□□□ -0.25
LRFN3-201ENST00000246529 CCDC140Q96MF4 163 aa13.47□□□□□ -0.25
LRFN3-201ENST00000246529 IGHV3-49A0A0A0MS15 119 aa13.47□□□□□ -0.25
LRFN3-201ENST00000246529 BRD3OSQ6XYD6 125 aa13.47□□□□□ -0.25
LRFN3-201ENST00000246529 TXN2Q99757 166 aa13.47□□□□□ -0.25
LRFN3-201ENST00000246529 ZFAND3Q9H8U3 227 aa13.47□□□□□ -0.25
LRFN3-201ENST00000246529 NUTF2P61970 127 aaKnown RBP13.46□□□□□ -0.25
LRFN3-201ENST00000246529 NDFIP1Q9BT67 221 aa13.46□□□□□ -0.25
LRFN3-201ENST00000246529 ZNF207O43670 478 aaKnown RBP13.46□□□□□ -0.26
LRFN3-201ENST00000246529 SCGB2A1O75556 95 aa13.46□□□□□ -0.26
LRFN3-201ENST00000246529 ZNF80P51504 273 aaPredicted RBP13.46□□□□□ -0.26
LRFN3-201ENST00000246529 RIGQ13278 110 aa13.46□□□□□ -0.26
LRFN3-201ENST00000246529 LINC00614P0C842 121 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 BATFQ16520 125 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 LYZL1Q6UWQ5 148 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 RNF182Q8N6D2 247 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 C5orf56Q8N8D9 126 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 PRR25Q96S07 402 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 ABCA2Q9BZC7 2435 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 PIEZO1Q92508 2521 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 TMEM213A2RRL7 107 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 TMEM189A5PLL7 270 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 PRAC2D3DTV9 90 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 ERCC8Q13216 396 aa13.45□□□□□ -0.26
LRFN3-201ENST00000246529 CELSR2Q9HCU4 2923 aa13.44□□□□□ -0.26
LRFN3-201ENST00000246529 TMEM190Q8WZ59 177 aa13.44□□□□□ -0.26
LRFN3-201ENST00000246529 TIMM8BQ9Y5J9 83 aaPredicted RBP13.44□□□□□ -0.26
LRFN3-201ENST00000246529 CLPSL1A2RUU4 121 aa13.44□□□□□ -0.26
LRFN3-201ENST00000246529 FAM162BQ5T6X4 162 aa13.44□□□□□ -0.26
LRFN3-201ENST00000246529 CHCHD1Q96BP2 118 aaKnown RBP13.44□□□□□ -0.26
LRFN3-201ENST00000246529 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
LRFN3-201ENST00000246529 BUB3O43684 328 aa13.43□□□□□ -0.26
LRFN3-201ENST00000246529 IGLC3P0DOY3 106 aa13.43□□□□□ -0.26
LRFN3-201ENST00000246529 FLNCQ14315 2725 aa13.42□□□□□ -0.26
LRFN3-201ENST00000246529 TRAV40A0A0B4J280 105 aa13.42□□□□□ -0.26
LRFN3-201ENST00000246529 MCRIP2Q9BUT9 160 aaKnown RBP13.42□□□□□ -0.26
LRFN3-201ENST00000246529 PAX8Q06710 450 aa13.42□□□□□ -0.26
LRFN3-201ENST00000246529 PIFOQ8TCI5 191 aa13.42□□□□□ -0.26
LRFN3-201ENST00000246529 TMEM70Q9BUB7 260 aa13.42□□□□□ -0.26
LRFN3-201ENST00000246529 UTP20O75691 2785 aaKnown RBP13.41□□□□□ -0.26
LRFN3-201ENST00000246529 TCAPO15273 167 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 SAPCD1Q5SSQ6 148 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 LEPROTL1O95214 131 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 GOSR1O95249 250 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 Q6ZN92 141 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 EEF1AKMT3Q96AZ1 226 aa13.41□□□□□ -0.26
LRFN3-201ENST00000246529 ZNF575Q86XF7 245 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 AMN1Q8IY45 258 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 CCL19Q99731 98 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 UQCR10Q9UDW1 63 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 CSMD2Q7Z408 3487 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 H0Y8G0 127 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 IGHV4-38-2P0DP08 117 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 KLK9Q2XQG4 91 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 Q6AWC8 147 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 GATD1Q8NB37 220 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 KLK9Q9UKQ9 250 aa13.4□□□□□ -0.26
LRFN3-201ENST00000246529 CRYBG3Q68DQ2 2970 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 IGLL1P15814 213 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 FAM106AQ4KMX7 169 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 TP73-AS1Q9UF72 201 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 SPG11Q96JI7 2443 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 TRAV9-2A0A087WT02 112 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 D6R8Y8 96 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 G0S2P27469 103 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 LY6EQ16553 131 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 COX8CQ7Z4L0 72 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 MOB4Q9Y3A3 225 aa13.39□□□□□ -0.27
LRFN3-201ENST00000246529 IGSF10Q6WRI0 2623 aa13.38□□□□□ -0.27
LRFN3-201ENST00000246529 TRAV41A0A0B4J266 112 aa13.38□□□□□ -0.27
LRFN3-201ENST00000246529 LOC389332A0A1B0GUA5 103 aa13.38□□□□□ -0.27
LRFN3-201ENST00000246529 PIMREGQ9BSJ6 248 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms