RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 HIST2H2BEQ16778 126 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.25□□□□□ -0.77
NUP85-201ENST00000245544 HIST2H2BDQ6DRA6 164 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 C16orf54Q6UWD8 224 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 Q8N2B8 174 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 HIST1H2BHQ93079 126 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 HIST1H2BNQ99877 126 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 HIST1H2BMQ99879 126 aa10.25□□□□□ -0.77
NUP85-201ENST00000245544 TRAV8-2A0A0B4J237 113 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 CHEK1O14757 476 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 FAM209BQ5JX69 171 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 TMEM183AQ8IXX5 376 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 HIVEP2P31629 2446 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 TMEM89A2RUT3 159 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 GATCO43716 136 aaKnown RBP10.24□□□□□ -0.77
NUP85-201ENST00000245544 ZNF253O75346 499 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 TRGC1P0CF51 173 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 FOXE3Q13461 319 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 SMIM12Q96EX1 92 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 ZC2HC1AQ96GY0 325 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 VGLL1Q99990 258 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 BIN3Q9NQY0 253 aa10.24□□□□□ -0.77
NUP85-201ENST00000245544 C19orf71A6NCJ1 209 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 C5orf52A6NGY3 159 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 CSN1S1P47710 185 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 LCN12Q6JVE5 192 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 C18orf65Q6ZTR6 163 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 C8orf86Q6ZUL3 223 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 MYOZ3Q8TDC0 251 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 C8orf49Q96NF6 230 aa10.23□□□□□ -0.77
NUP85-201ENST00000245544 TRBV6-1A0A0K0K1D8 114 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 ELANEP08246 267 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 GPHB5Q86YW7 130 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 TMEM86BQ8N661 226 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 TEX29Q8N6K0 151 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 Q8TAT8 98 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 FLNBO75369 2602 aaKnown RBP10.22□□□□□ -0.77
NUP85-201ENST00000245544 SMIM27A0A1W2PRY6 76 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 K7EQM0 130 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 S100A6P06703 90 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 CRIP1P50238 77 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 FABP9Q0Z7S8 132 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 Q6ZSV7 163 aa10.22□□□□□ -0.77
NUP85-201ENST00000245544 IGHV7-4-1A0A0J9YVY3 117 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 ERCC8Q13216 396 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 ACTL10Q5JWF8 245 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 KLHDC1Q8N7A1 406 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 RNF152Q8N8N0 203 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 GRAMD2BQ96HH9 432 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 BTF3L4Q96K17 158 aa10.21□□□□□ -0.77
NUP85-201ENST00000245544 IGKV3-7A0A075B6H7 116 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 IGHV4OR15-8A0A075B7B6 117 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 A0A087WW49 117 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 CBLN1P23435 193 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 NDUFA6P56556 154 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 RHPN1-AS1Q9BWJ2 59 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.78
NUP85-201ENST00000245544 ZNF492Q9P255 531 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 ZFP30Q9Y2G7 519 aa10.21□□□□□ -0.78
NUP85-201ENST00000245544 HIVEP1P15822 2718 aa10.2□□□□□ -0.78
NUP85-201ENST00000245544 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
NUP85-201ENST00000245544 GBGT1Q8N5D6 347 aa10.2□□□□□ -0.78
NUP85-201ENST00000245544 C20orf173Q96LM9 149 aa10.2□□□□□ -0.78
NUP85-201ENST00000245544 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
NUP85-201ENST00000245544 GPR61Q9BZJ8 451 aa10.2□□□□□ -0.78
NUP85-201ENST00000245544 RPP21Q9H633 154 aaKnown RBP10.2□□□□□ -0.78
NUP85-201ENST00000245544 TRAPPC1Q9Y5R8 145 aa10.2□□□□□ -0.78
NUP85-201ENST00000245544 P01737 135 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 LGALS1P09382 135 aaKnown RBP10.19□□□□□ -0.78
NUP85-201ENST00000245544 SRD5A1P18405 259 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 DEFB136Q30KP8 78 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 FAM106AQ4KMX7 169 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 MRPL54Q6P161 138 aaKnown RBP10.19□□□□□ -0.78
NUP85-201ENST00000245544 TCF24Q7RTU0 167 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 UBE2E2Q96LR5 201 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 NEU1Q99519 415 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 SMPXQ9UHP9 88 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 TRAV9-1A0A075B6T8 112 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 GZMBP10144 247 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 RPL19P84098 196 aaKnown RBP10.19□□□□□ -0.78
NUP85-201ENST00000245544 NUP35Q8NFH5 326 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 TSKUQ8WUA8 353 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 GTSF1Q8WW33 167 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 DAZAP1Q96EP5 407 aaKnown RBP10.19□□□□□ -0.78
NUP85-201ENST00000245544 C16orf92Q96LL3 132 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 PRR25Q96S07 402 aa10.19□□□□□ -0.78
NUP85-201ENST00000245544 NSD1Q96L73 2696 aaPredicted RBP10.18□□□□□ -0.78
NUP85-201ENST00000245544 SERTM2A0A1B0GWG4 89 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 NPIPB6E9PJ23 425 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 DEFB1P60022 68 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 RPL11P62913 178 aaKnown RBP10.18□□□□□ -0.78
NUP85-201ENST00000245544 GFI1BQ5VTD9 330 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 ARL6IP6Q8N6S5 226 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 A0A1W2PS18 150 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 TMEM213A2RRL7 107 aa10.18□□□□□ -0.78
NUP85-201ENST00000245544 K7EMT4 169 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms