RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 LINC01006Q8NI28 216 aa12.79□□□□□ -0.36
TVP23C-201ENST00000225576 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
TVP23C-201ENST00000225576 CLEC5AQ9NY25 188 aa12.79□□□□□ -0.36
TVP23C-201ENST00000225576 FBLL1A6NHQ2 334 aaKnown RBP12.78□□□□□ -0.36
TVP23C-201ENST00000225576 A8MWP6 167 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 NDUFA7O95182 113 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 FOLR2P14207 255 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 RAB5AP20339 215 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 HOXD3P31249 432 aaPredicted RBP12.78□□□□□ -0.36
TVP23C-201ENST00000225576 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
TVP23C-201ENST00000225576 C8orf86Q6ZUL3 223 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 Q86TA4 180 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 NHLRC2Q8NBF2 726 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 MRPL53Q96EL3 112 aaKnown RBP12.78□□□□□ -0.36
TVP23C-201ENST00000225576 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 ZFP30Q9Y2G7 519 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 TRBV24-1A0A075B6N3 115 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 INAFM1C9JVW0 142 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 LCN12Q6JVE5 192 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 FAM231DQ6ZW35 169 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 Q71RC1 249 aaPredicted RBP12.78□□□□□ -0.36
TVP23C-201ENST00000225576 C1QL4Q86Z23 238 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 TMEM183AQ8IXX5 376 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 PYGO2Q9BRQ0 406 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 PSG8Q9UQ74 426 aa12.78□□□□□ -0.36
TVP23C-201ENST00000225576 TGIF2-C20orf24A0A0A6YYL0 155 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 TRAV8-2A0A0B4J237 113 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 TMEM213A2RRL7 107 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 CXCL1P09341 107 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 FOXL1Q12952 345 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 KLF5Q13887 457 aaPredicted RBP12.77□□□□□ -0.37
TVP23C-201ENST00000225576 IGFL4Q6B9Z1 124 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 KCNIP4Q6PIL6 250 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 C18orf65Q6ZTR6 163 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 PRNTQ86SH4 94 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 V9GYV3 84 aa12.77□□□□□ -0.37
TVP23C-201ENST00000225576 HIVEP2P31629 2446 aa12.76□□□□□ -0.37
TVP23C-201ENST00000225576 LINC01619G3V211 115 aa12.76□□□□□ -0.37
TVP23C-201ENST00000225576 HLA-DMBP28068 263 aa12.76□□□□□ -0.37
TVP23C-201ENST00000225576 SYNJ2BPP57105 145 aa12.76□□□□□ -0.37
TVP23C-201ENST00000225576 IBA57Q5T440 356 aaKnown RBP12.76□□□□□ -0.37
TVP23C-201ENST00000225576 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
TVP23C-201ENST00000225576 MXRA5Q9NR99 2828 aa12.76□□□□□ -0.37
TVP23C-201ENST00000225576 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
TVP23C-201ENST00000225576 FAM210BQ96KR6 192 aa12.75□□□□□ -0.37
TVP23C-201ENST00000225576 C16orf92Q96LL3 132 aa12.75□□□□□ -0.37
TVP23C-201ENST00000225576 NRN1Q9NPD7 142 aa12.75□□□□□ -0.37
TVP23C-201ENST00000225576 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
TVP23C-201ENST00000225576 ZNF492Q9P255 531 aa12.75□□□□□ -0.37
TVP23C-201ENST00000225576 ZNF705FA8MVS1 300 aaPredicted RBP12.74□□□□□ -0.37
TVP23C-201ENST00000225576 SOCS3O14543 225 aa12.74□□□□□ -0.37
TVP23C-201ENST00000225576 KHDC1LQ5JSQ8 128 aa12.74□□□□□ -0.37
TVP23C-201ENST00000225576 OR11H1Q8NG94 326 aa12.74□□□□□ -0.37
TVP23C-201ENST00000225576 OR1N2Q8NGR9 330 aa12.74□□□□□ -0.37
TVP23C-201ENST00000225576 DPF1Q92782 380 aa12.74□□□□□ -0.37
TVP23C-201ENST00000225576 BTF3L4Q96K17 158 aa12.74□□□□□ -0.37
TVP23C-201ENST00000225576 IGKV2-40A0A087WW87 121 aaPredicted RBP12.73□□□□□ -0.37
TVP23C-201ENST00000225576 TCF21O43680 179 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 IGKV2D-40P01614 121 aaPredicted RBP12.73□□□□□ -0.37
TVP23C-201ENST00000225576 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 RNF182Q8N6D2 247 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 KLHL30-AS1Q8NEE0 82 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 NUDT10Q8NFP7 164 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 NUDT11Q96G61 164 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 MLXQ9UH92 298 aa12.73□□□□□ -0.37
TVP23C-201ENST00000225576 TRAV9-1A0A075B6T8 112 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 CRLF1O75462 422 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 EDN2P20800 178 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 FAM3BP58499 235 aaPredicted RBP12.72□□□□□ -0.37
TVP23C-201ENST00000225576 DEFB136Q30KP8 78 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 SAPCD1Q5SSQ6 148 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 SAMD13Q5VXD3 122 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 PRR27Q6MZM9 219 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 ANK3Q12955 4377 aaKnown RBP12.72□□□□□ -0.37
TVP23C-201ENST00000225576 A0A1W2PPQ1 181 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 C19orf71A6NCJ1 209 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 C2orf70A6NJV1 201 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 ZNF705GA8MUZ8 300 aaPredicted RBP12.72□□□□□ -0.37
TVP23C-201ENST00000225576 GATCO43716 136 aaKnown RBP12.72□□□□□ -0.37
TVP23C-201ENST00000225576 CD28P10747 220 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 CBLN1P23435 193 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 RPS10P46783 165 aaKnown RBP12.72□□□□□ -0.37
TVP23C-201ENST00000225576 RPL11P62913 178 aaKnown RBP12.72□□□□□ -0.37
TVP23C-201ENST00000225576 COX8CQ7Z4L0 72 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 VGLL1Q99990 258 aa12.72□□□□□ -0.37
TVP23C-201ENST00000225576 PRAC2D3DTV9 90 aa12.71□□□□□ -0.38
TVP23C-201ENST00000225576 SLURP1P55000 103 aa12.71□□□□□ -0.38
TVP23C-201ENST00000225576 LINC00322Q6ZN03 302 aaPredicted RBP12.71□□□□□ -0.38
TVP23C-201ENST00000225576 RNF114Q9Y508 228 aa12.71□□□□□ -0.38
TVP23C-201ENST00000225576 TSSC4Q9Y5U2 329 aaPredicted RBP12.71□□□□□ -0.38
TVP23C-201ENST00000225576 C1orf196B1AJZ1 125 aa12.7□□□□□ -0.38
TVP23C-201ENST00000225576 TYMSP04818 313 aa12.7□□□□□ -0.38
TVP23C-201ENST00000225576 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
TVP23C-201ENST00000225576 GBGT1Q8N5D6 347 aa12.7□□□□□ -0.38
TVP23C-201ENST00000225576 DAZAP1Q96EP5 407 aaKnown RBP12.7□□□□□ -0.38
TVP23C-201ENST00000225576 PRR25Q96S07 402 aa12.7□□□□□ -0.38
TVP23C-201ENST00000225576 PEMTQ9UBM1 199 aa12.7□□□□□ -0.38
TVP23C-201ENST00000225576 SMIM27A0A1W2PRY6 76 aa12.69□□□□□ -0.38
TVP23C-201ENST00000225576 M0QZ24 198 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms