RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 BOD1L2Q8IYS8 172 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 CRYGCP07315 174 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 SAP25Q8TEE9 199 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 CARD19Q96LW7 228 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 TRGV9Q99603 122 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 NRXN3Q9Y4C0 1643 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 TREML4Q6UXN2 200 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 ITGBL1O95965 494 aaPredicted RBP11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 SIPA1L1O43166 1804 aa11.97□□□□□ -0.49
SPTLC2-201ENST00000216484 SLC25A16P16260 332 aa11.96□□□□□ -0.49
SPTLC2-201ENST00000216484 WFDC1Q9HC57 220 aa11.96□□□□□ -0.49
SPTLC2-201ENST00000216484 CHCHD2Q9Y6H1 151 aaPredicted RBP11.96□□□□□ -0.49
SPTLC2-201ENST00000216484 GAGE12HA6NDE8 117 aa11.96□□□□□ -0.49
SPTLC2-201ENST00000216484 IL17RELQ6ZVW7 336 aa11.96□□□□□ -0.49
SPTLC2-201ENST00000216484 GLRX5Q86SX6 157 aa11.96□□□□□ -0.5
SPTLC2-201ENST00000216484 LINC01551Q86U37 167 aa11.96□□□□□ -0.5
SPTLC2-201ENST00000216484 C15orf53Q8NAA6 179 aa11.96□□□□□ -0.5
SPTLC2-201ENST00000216484 RHODO00212 210 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 FNDC1Q4ZHG4 1894 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 ANGP03950 147 aaKnown RBP11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 NUP210Q8TEM1 1887 aaPredicted RBP11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 ZNF329Q86UD4 541 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 CFHR4Q92496 578 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 IGKV1D-43A0A0B4J1Z2 117 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 CEND1Q8N111 149 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 TRBV24-1A0A075B6N3 115 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 BRK1Q8WUW1 75 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 TMEM200BQ69YZ2 307 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 SPANXCQ9NY87 97 aa11.95□□□□□ -0.5
SPTLC2-201ENST00000216484 MRPL27Q9P0M9 148 aaKnown RBP11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 PRO1854Q9UHT4 67 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 KNCNA6PVL3 124 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 IGKV1-5P01602 117 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 USMG5Q96IX5 58 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 ORMDL1Q9P0S3 153 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 PCNX3Q9H6A9 2034 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 H3BMG7 143 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 H3BUX3 64 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 ID3Q02535 119 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 ZNF837Q96EG3 531 aaPredicted RBP11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 CFHR2P36980 270 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 TMEM141Q96I45 108 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 TMEM243Q9BU79 118 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 B5MCH6 92 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 FUSP35637 526 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 RNF166Q96A37 237 aaPredicted RBP11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 XCL2Q9UBD3 114 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 RNF114Q9Y508 228 aa11.94□□□□□ -0.5
SPTLC2-201ENST00000216484 VWC2Q2TAL6 325 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 C9orf139Q6ZV77 190 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 GATA4P43694 442 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 SPINK13Q1W4C9 94 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 ETDBQ3ZM63 59 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 BRD3OSQ6XYD6 125 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 RMI2Q96E14 147 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 NLRC5Q86WI3 1866 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 FAM223BA6NKX1 122 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 K7EP13 123 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 RPL18AQ02543 176 aaKnown RBP11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 FAM223AQ8IWN6 122 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 IGHV1-3A0A0C4DH29 117 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 SPTSSBQ8NFR3 76 aa11.93□□□□□ -0.5
SPTLC2-201ENST00000216484 IGHV3-38A0A0C4DH36 116 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 LINC00271P0C7V0 271 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 A0A1B0GWJ7 208 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 C10orf55Q5SWW7 151 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 FAM166AQ6J272 317 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 A0A096LPF7 62 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 F6UB75 175 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 FAM181AQ8N9Y4 354 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 TIMM17AQ99595 171 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 HLA-DRB4P13762 266 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 MP68P56378 58 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 HLA-DRB4X5D2U9 266 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 K7ERJ3 54 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 ARMS2P0C7Q2 107 aa11.92□□□□□ -0.5
SPTLC2-201ENST00000216484 TMEM190Q8WZ59 177 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 NCOR1P1Q9H4R4 102 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 C5orf67F2Z3F1 127 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 TGFBR3LH3BV60 316 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 C8orf49Q96NF6 230 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 KLK9Q9UKQ9 250 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 IGF2BP2-AS1Q96M15 143 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 COLCA2A8K830 154 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 C4orf51C9J302 202 aa11.91□□□□□ -0.5
SPTLC2-201ENST00000216484 A0A1W2PPM0 123 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 MPZP25189 248 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 WBP1Q96G27 269 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 PROP1O75360 226 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 DEFB131AP59861 70 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 LY6DQ14210 128 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 HLA-DMBP28068 263 aa11.9□□□□□ -0.5
SPTLC2-201ENST00000216484 C4orf48Q5BLP8 95 aa11.9□□□□□ -0.51
SPTLC2-201ENST00000216484 RNASE13Q5GAN3 156 aaKnown RBP11.9□□□□□ -0.51
SPTLC2-201ENST00000216484 CTHRC1Q96CG8 243 aa11.9□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms