RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Jmjd1cQ69ZK6 2350 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Defa34D3Z0J0 93 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Adcyap1O70176 175 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Hspb7P35385 169 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Sssca1P56873 199 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1228Q8VGM9 323 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ms4a6cQ99N08 217 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 RlfA2A7F4 1918 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 F2rl1P55086 399 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Tmem171Q4KL18 322 aa13.25□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Pax9P47242 342 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Pdlim4P70271 330 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 MyocosQ3UWS6 143 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr715bE9Q725 315 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 B2mP01887 119 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Nudt10P0C027 164 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Nudt11P0C028 164 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Defa13P50711 93 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 PilraQ2YFS3 302 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Apobec4Q497M3 374 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1246Q7TQZ6 314 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Rhbdd1Q8BHC7 315 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Tmem230Q8CIB6 120 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Rhbdd2Q8VEK2 361 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Dram1Q9DC58 238 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Trbv15A0A0A6YYE3 115 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Zfp114B2RRA8 586 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ubald1Q6P3B2 176 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Obp2aQ8K1H9 176 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1392Q8VFA6 311 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr508Q8VG42 310 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Zfp976E9Q981 636 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 PnkdQ69ZP3 385 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Cd200r5Q8BTP3 270 aa13.24□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm10665K7N6B7 321 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gosr1O88630 250 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Zfp936Q3ULA8 456 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr16Q62007 309 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Zfp677Q6PEP4 634 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1009Q8VFK1 314 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Mpdu1Q9R0Q9 247 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ep400Q8CHI8 3072 aaKnown RBP13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1293-psA0A1L1SVB5 326 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Tnfsf12O54907 249 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Trat1Q3UU67 187 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 AdoQ6PDY2 256 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Q91WE4 72 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Mgst3Q9CPU4 153 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Pxmp4Q9JJW0 212 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Hoxa5P09021 270 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm10912Q3UXH0 145 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Prss46Q5M8S2 314 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Acsm5Q8BGA8 578 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ly6g6fB2RXM6 300 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 CrygsO35486 178 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Syngr2O55101 224 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Csrp2P97314 193 aaKnown RBP13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 TskuQ8CBR6 354 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Cd226Q8K4F0 333 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Plppr2Q8VCY8 343 aa13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Heatr1G3X9B1 2143 aaKnown RBP13.23□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr218E9PWV2 313 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm6594J3QM43 95 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Zfp874bQ7M6X2 447 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Ubald2Q8BQH4 164 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Bricd5Q8BV89 174 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Slc35e4Q8K3D6 351 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Slc37a1Q8R070 531 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gtf3aQ8VHT7 364 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gng10Q9CXP8 68 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Rab1bQ9D1G1 201 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm14443A2ARX0 610 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Defa35E9QLQ1 93 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Hoxb2P0C1T1 354 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 EcscrQ3TZW0 214 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Pcgf1Q8R023 259 aaKnown RBP13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr1330Q8VEY6 315 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr816Q8VFU2 312 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 G6pcP35576 357 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Rnf224Q3UIW8 156 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Spata22Q5SV06 358 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Lax1Q8BHB3 407 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Tlcd2Q8VC26 310 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 1700008P02RikQ9DAJ8 175 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm28845A0A087WR76 214 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm37797A0A1D5RLC8 261 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Defa30E9QPZ2 93 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Rpl31P62900 125 aaKnown RBP13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Hhipl1Q14DK5 791 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gpank1Q61858 372 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Olfr874Q7TRE6 310 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Tmprss11fQ8BHM9 439 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Loxl4Q924C6 757 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Lhx2Q9Z0S2 406 aa13.22□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm20219A0A1B0GRQ3 87 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Slc25a53A2AF28 346 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 3110082J24RikF6Z6Z2 108 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Gm10130F6ZHM5 101 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Colca2F8VPY8 239 aa13.21□□□□□ -0.29
Ccdc88b-201ENSMUST00000113440 Nat8f4G5E8L3 226 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 56 ms