RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Gpr132Q9Z282 382 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 6330409D20RikA2AK85 162 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Vmn1r1E9PVR6 306 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rpl27aP14115 148 aaKnown RBP10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Bud31Q6PGH1 103 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr876Q7TRE4 310 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Rgp1Q8BHT7 391 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Gm10190Q8BSD7 107 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Depp1Q8K2F3 205 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tmem183Q9JJB9 375 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Mn1D3YWE6 1297 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Sfrp2P97299 295 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 AsipQ03288 131 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Clpsl2Q3UW21 102 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Ptrh2Q8R2Y8 181 aaKnown RBP10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Olfr877Q8VF62 311 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 BmfQ91ZE9 185 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tlnrd1Q9ERE8 362 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 Prss21Q9JHJ7 324 aa10.34□□□□□ -0.75
Trim56-201ENSMUST00000054384 AtrxQ61687 2476 aaKnown RBP10.33□□□□□ -0.75
Trim56-201ENSMUST00000054384 Tstd1E9PY03 133 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Wfdc18P62810 74 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Reep5Q60870 185 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr148Q60887 310 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Rpl36-ps4A0A140T8U4 117 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Spsb2O88838 264 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 A3galt2Q3V1N9 370 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Muc15Q8C6Z1 331 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 MylkQ6PDN3 1941 aaKnown RBP10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Armcx4E9PWM3 2356 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr753-ps1A0A140LHN3 164 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Sfrp4Q9Z1N6 351 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 H60bB1B212 251 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 MpdzQ8VBX6 2055 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Igkv4-91A0A075B5L2 119 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Casp8ap2Q9WUF3 1962 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr466E9Q2B9 308 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm609E9Q573 300 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Mesp2O08574 370 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 GhitmQ91VC9 346 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Mpv17lQ99MS3 194 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ndufa2Q9CQ75 99 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm5225J3QPL3 108 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ifi27Q8C6G0 260 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 CcsQ9WU84 274 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr530Q8VFE8 307 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Rab29Q91YQ1 204 aa10.33□□□□□ -0.76
Trim56-201ENSMUST00000054384 Fgf12P61329 243 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ccl7Q03366 97 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ceacam10Q61400 265 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ifna11Q61716 190 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ndufb3Q9CQZ6 104 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Trav12-2A0N8N6 114 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Hmga2P52927 108 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Arf6P62331 175 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Spink11Q09TK7 88 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Trpt1Q8K3A2 249 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Asb5Q9D1A4 329 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Zdbf2Q5SS00 2493 aaKnown RBP10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ighv14-2A0A075B5R7 117 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ighv7-4A0A0A6YXL5 121 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Nckap5E9QAE1 1909 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Zfp950A0A0U1RQ46 609 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 BC030500E9Q6W0 185 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Sf3b6P59708 125 aaKnown RBP10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Sumo2P61957 95 aaKnown RBP10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Snrpd3P62320 126 aaKnown RBP10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 AdipoqQ60994 247 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Atxn7l2Q8C8K6 696 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr1016A2ASV2 309 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 SriQ6P069 198 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tmem74bA2AU34 232 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 CebpbP28033 296 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Crispld2Q8BZQ2 495 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Klk14Q8CGR5 250 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ptp4a3Q9D658 173 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Pgpep1Q9ESW8 209 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ltbp1Q8CG19 1712 aa10.32□□□□□ -0.76
Trim56-201ENSMUST00000054384 BC024063A0A1W2P7G7 749 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ccl4P14097 92 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 PnkdQ69ZP3 385 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Plscr2Q9DCW2 307 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 TinagQ9WUR0 475 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Plin4O88492 1403 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 C2cd4aE9Q861 334 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Hhipl1Q14DK5 791 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Anapc13Q8R034 74 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Lrrc26Q91W20 331 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Shisal2bQ9D1Y9 158 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Med12A2AGH6 2190 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Trav15-2-dv6-2A0A075B650 123 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm7849D3YX03 116 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm20532G3UXR8 106 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Gm20939L7N243 523 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Cacng7P62956 275 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Olfr1380Q7TQT5 311 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 PaxxQ8K0Y7 205 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Lims2Q91XD2 341 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Ighv1-42A0A0A6YY38 117 aa10.31□□□□□ -0.76
Trim56-201ENSMUST00000054384 Tcrg-V4A0A0B4J1J8 138 aa10.31□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 62 ms