RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 SH2D1AO60880 128 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 FAM168AQ92567 244 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 ALKBH7Q9BT30 221 aaPredicted RBP6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 COL5A1P20908 1838 aaPredicted RBP6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 TRBV19A0A075B6N1 114 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 TRAV8-6A0A0B4J262 113 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 SMAD7O15105 426 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 PSMB2P49721 201 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 SNRPD3P62318 126 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 SEC11AP67812 179 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 SAMD13Q5VXD3 122 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 OR1N2Q8NGR9 330 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 SPTAN1Q13813 2472 aaKnown RBP6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 PAX1P15863 534 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 EFNA4P52798 201 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 TTC9CQ8N5M4 171 aa6.89□□□□□ -1.31
HNRNPU-219ENST00000639628 WIPF2Q8TF74 440 aaPredicted RBP6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 SCGB3A1Q96QR1 104 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 ARMS2P0C7Q2 107 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 IGLC1P0CG04 106 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 DYNLRB2Q8TF09 96 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 IGLC7A0M8Q6 106 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 IGLC2P0DOY2 106 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 IGLC3P0DOY3 106 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 BRWD1-AS2P59051 145 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 PAX8Q06710 450 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 OR9G4Q8NGQ1 327 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 TRAV21A0A0B4J279 112 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 K7ENP7 123 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 ZNF138P52744 262 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 GUSBP1Q15486 140 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 SEM1Q6ZVN7 128 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 PRO3102Q9H379 93 aa6.88□□□□□ -1.31
HNRNPU-219ENST00000639628 CPAMD8Q8IZJ3 1885 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 PRR14LQ5THK1 2151 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 KIR2DL5BA0A0G2JN68 375 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 KIR2DL5BA0A0G2JPC4 375 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 PRB4P10163 310 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 PPIFP30405 207 aaKnown RBP6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 PRR30Q53SZ7 412 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 KIR2DL5AQ8N109 375 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 ORAOV1Q8WV07 137 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 YPEL4Q96NS1 127 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 CTSZQ9UBR2 303 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 SMPXQ9UHP9 88 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 MOB4Q9Y3A3 225 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 ARHGAP21Q5T5U3 1957 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 LY6HO94772 140 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 DPM2O94777 84 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 SSBP2P81877 361 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 SRSF1Q07955 248 aaKnown RBP eCLIP6.87□□□□□ -1.313e-7■■□□□ 14.5
HNRNPU-219ENST00000639628 SIGLEC15Q6ZMC9 328 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 TRAV41A0A0B4J266 112 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 SH2D7A6NKC9 451 aaPredicted RBP6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 HAX1O00165 279 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 HSD52Q0P140 79 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 Q8TAT8 98 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 MED13LQ71F56 2210 aa6.87□□□□□ -1.31
HNRNPU-219ENST00000639628 TRBV7-1A0A0A6YYK4 115 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 INS-IGF2F8WCM5 200 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 H3BRN7 92 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 OVOL1O14753 267 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 PROP1O75360 226 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 EIF4EBP1Q13541 118 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 MPV17L2Q567V2 206 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 FAM74A4Q5TZK3 123 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 RCHY1Q96PM5 261 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 NCKAP5O14513 1909 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 NPIPB6E9PJ23 425 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 NDUFB8O95169 186 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 NCR2O95944 276 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 IGHV3-11P01762 117 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 ZNF56Q15929 161 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 MSMPQ1L6U9 139 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 ORMDL2Q53FV1 153 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 LTAP01374 205 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 AMN1Q8IY45 258 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 CENPFP49454 3210 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 LOC107984156A0A0G2JMH3 177 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 H3BUT2 72 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 IGKCP01834 107 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 LGALS3P17931 250 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 EVI2AP22794 236 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 RNASE4P34096 147 aaKnown RBP6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 DAZAP2Q15038 168 aaPredicted RBP6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 C9orf139Q6ZV77 190 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 ARL17AQ8IVW1 177 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 SPCS1Q9Y6A9 102 aa6.86□□□□□ -1.31
HNRNPU-219ENST00000639628 CGB3P0DN86 165 aa6.85□□□□□ -1.31
HNRNPU-219ENST00000639628 CGB7P0DN87 165 aa6.85□□□□□ -1.31
HNRNPU-219ENST00000639628 SHISA9B4DS77 424 aa6.85□□□□□ -1.31
HNRNPU-219ENST00000639628 DMRTC2Q8IXT2 367 aaPredicted RBP6.85□□□□□ -1.31
HNRNPU-219ENST00000639628 ATG2AQ2TAZ0 1938 aa6.85□□□□□ -1.31
HNRNPU-219ENST00000639628 WDR87Q6ZQQ6 2873 aa6.85□□□□□ -1.31
HNRNPU-219ENST00000639628 IGKV1OR2-108A0A075B7D4 117 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms