RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 TTC9CQ8N5M4 171 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 LYPD6BQ8NI32 183 aa11.61□□□□□ -0.55
SCARB2-216ENST00000639300 PRRC2CQ9Y520 2896 aaKnown RBP11.61□□□□□ -0.55
SCARB2-216ENST00000639300 SLX1AQ9BQ83 275 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 IGHV2-5P01817 119 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 TDGF1P13385 188 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 ZNF833PQ6ZTB9 187 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 M0R1W7 72 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 GEMIN7Q9H840 131 aaKnown RBP11.6□□□□□ -0.55
SCARB2-216ENST00000639300 NACAE9PAV3 2078 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 TRAV21A0A0B4J279 112 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 FAM181BA6NEQ2 426 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 OOSP1A8MZH6 123 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 BEX4Q9NWD9 120 aaPredicted RBP11.6□□□□□ -0.55
SCARB2-216ENST00000639300 MOB4Q9Y3A3 225 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 MSRB2Q9Y3D2 182 aa11.6□□□□□ -0.55
SCARB2-216ENST00000639300 hDV102S1A0JD36 115 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SNCGO76070 127 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SMIM13P0DJ93 91 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SIGLEC15Q6ZMC9 328 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 NPFFO15130 113 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 PPBPP02775 128 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 KRTAP27-1Q3LI81 207 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SFTA2Q6UW10 78 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 ZNF562Q6V9R5 426 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 DUX3Q96PT4 197 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SORL1Q92673 2214 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 AMN1Q8IY45 258 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 CHCHD1Q96BP2 118 aaKnown RBP11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SPRY4Q9C004 299 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 SMKR1H3BMG3 65 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 TOMM40O96008 361 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 TEX36Q5VZQ5 186 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 NCOR1P1Q9H4R4 102 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 TNFRSF18Q9Y5U5 241 aa11.59□□□□□ -0.55
SCARB2-216ENST00000639300 NDUFB8O95169 186 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 PSG3Q16557 428 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 JMJD8Q96S16 334 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 NXT2Q9NPJ8 142 aaKnown RBP11.58□□□□□ -0.56
SCARB2-216ENST00000639300 SH2D1AO60880 128 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 APOMO95445 188 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 FNDC4Q9H6D8 234 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-216ENST00000639300 H3BUT2 72 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 ZNF688P0C7X2 276 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 SHANK2-AS3Q9BTD1 123 aa11.58□□□□□ -0.56
SCARB2-216ENST00000639300 ANKRD11Q6UB99 2663 aaPredicted RBP11.58□□□□□ -0.56
SCARB2-216ENST00000639300 GRNP28799 593 aaKnown RBP11.57□□□□□ -0.56
SCARB2-216ENST00000639300 G3V318 75 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 PPP1R17O96001 155 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 Q86TA4 180 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 IGFBPL1Q8WX77 278 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 BEND2Q8NDZ0 799 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 F2Z2F3 143 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 PRSS22Q9GZN4 317 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 CTSZQ9UBR2 303 aa11.57□□□□□ -0.56
SCARB2-216ENST00000639300 CHD3Q12873 2000 aaKnown RBP11.57□□□□□ -0.56
SCARB2-216ENST00000639300 NDUFS7O75251 213 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 LINC01587Q99440 93 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 PAPPA-AS1Q5QFB9 102 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 RASL11AQ6T310 242 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 NAA38Q9BRA0 125 aaKnown RBP11.56□□□□□ -0.56
SCARB2-216ENST00000639300 UBE2L6O14933 153 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 SUMO2P61956 95 aaKnown RBP11.56□□□□□ -0.56
SCARB2-216ENST00000639300 PRR20EP86478 221 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 PRR20CP86479 221 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 PRR20DP86480 221 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 PRR20BP86481 221 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 PRR20AP86496 221 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 ERCC8Q13216 396 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 C3orf36Q3SXR2 165 aa11.56□□□□□ -0.56
SCARB2-216ENST00000639300 NHP2Q9NX24 153 aaKnown RBP11.56□□□□□ -0.56
SCARB2-216ENST00000639300 USP9YO00507 2555 aaPredicted RBP11.56□□□□□ -0.56
SCARB2-216ENST00000639300 LDLRAD2Q5SZI1 272 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 SLC25A2Q9BXI2 301 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 KIAA1549LQ6ZVL6 1849 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 COX6CP09669 75 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 C18orf32Q8TCD1 76 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 PAX1P15863 534 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 SRSF1Q07955 248 aaKnown RBP eCLIP11.55□□□□□ -0.56
SCARB2-216ENST00000639300 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 LSM4Q9Y4Z0 139 aaKnown RBP11.55□□□□□ -0.56
SCARB2-216ENST00000639300 V9GYV3 84 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 USP9XQ93008 2570 aaPredicted RBP11.55□□□□□ -0.56
SCARB2-216ENST00000639300 PCP4P48539 62 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 SSBP2P81877 361 aaPredicted RBP11.55□□□□□ -0.56
SCARB2-216ENST00000639300 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
SCARB2-216ENST00000639300 H7C1H1 209 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 ATP6V0E1O15342 81 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 POU2AF1Q16633 256 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 MRPL16Q9NX20 251 aaKnown RBP11.54□□□□□ -0.56
SCARB2-216ENST00000639300 TYMSP04818 313 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 SPCS1Q9Y6A9 102 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 SLAQ13239 276 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 MEIG1Q5JSS6 88 aa11.54□□□□□ -0.56
SCARB2-216ENST00000639300 LINC00311Q8N616 119 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms